RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GLE1Q53GS7 698 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 CCDC170Q8IYT3 715 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 IFNL3Q8IZI9 196 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 ZNF654Q8IZM8 581 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 SNUPNO95149 360 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 PPP2R2AP63151 447 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 IFFO1Q0D2I5 559 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 STK4Q13043 487 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 UBAP2Q5T6F2 1119 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 MIS18BP1Q6P0N0 1132 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 SGMS1Q86VZ5 419 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 MAGEB6Q8N7X4 407 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 ZCRB1Q8TBF4 217 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 LRRC15Q8TF66 581 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 PDS5AQ29RF7 1337 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 ERICH2A1L162 156 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 KCNK3O14649 394 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 DAPK3O43293 454 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 EVI5O60447 810 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 ZFYP08048 801 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 VIMP08670 466 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 SLCO1A2P46721 670 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 CABP4P57796 275 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 PKN1Q16512 942 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 PPP4R3AQ6IN85 833 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 TAX1BP1Q86VP1 789 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 HOMEZQ8IX15 550 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 DUSP9Q99956 384 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 ATP8A1Q9Y2Q0 1164 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 GOLGB1Q14789 3259 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 FOXO6A8MYZ6 492 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 PPIP5K2O43314 1243 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 KLRC1P26715 233 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 LRRC14Q15048 493 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 CCDC38Q502W7 563 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 METTL24Q5JXM2 366 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 C3orf20Q8ND61 904 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 MGARPQ8TDB4 240 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 AMACRQ9UHK6 382 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 PDE6AP16499 860 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 ABL2P42684 1182 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 PHKA1P46020 1223 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 EVX2Q03828 476 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 DHX9Q08211 1270 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 RBBP5Q15291 538 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 SLC5A9Q2M3M2 681 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 MIIPQ5JXC2 388 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 SDR42E1Q8WUS8 393 aa12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-202ENST00000424880 CCT8L1PA6NM43 557 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 PYGLP06737 847 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 ITGA4P13612 1032 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 PECAM1P16284 738 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 DRD4P21917 467 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 NBPF15Q8N660 670 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.39□□□□□ -0.438e-7■■□□□ 13.5
SEC61A1-202ENST00000424880 MYO5AQ9Y4I1 1855 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 H0YGN5 161 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 H7C1W4 665 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 PSMA7O14818 248 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 TUBP50607 506 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 ALDH5A1P51649 535 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 RPS6KA3P51812 740 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 ADCY1Q08828 1119 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 USP4Q13107 963 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 TTI2Q6NXR4 508 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 LRRC34Q8IZ02 419 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 NOX5Q96PH1 765 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 STRBPQ96SI9 672 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 PRMT1Q99873 361 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 NFS1Q9Y697 457 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 A0A1W2PQC6 194 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 CEP104O60308 925 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 NMT2O60551 498 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 SMNDC1O75940 238 aaKnown RBP eCLIP12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 SNRPA1P09661 255 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 LINGO3P0C6S8 592 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 IL2RBP14784 551 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 CHN1P15882 459 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 ECHS1P30084 290 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 PRPHP41219 470 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 CACNA2D4Q7Z3S7 1137 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 NUCKS1Q9H1E3 243 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 EBF2Q9HAK2 575 aa12.39□□□□□ -0.43
SEC61A1-202ENST00000424880 UBOX5O94941 541 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 LIFRP42702 1097 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 PDE4DQ08499 809 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 NAALADL2Q58DX5 795 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 CCDC197Q8NCU1 140 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 TSGA10Q9BZW7 698 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms