RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 BFSP2Q13515 415 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 NECTIN1Q15223 517 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 PTGISQ16647 500 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 GDF6Q6KF10 455 aaPredicted RBP10.91□□□□□ -0.66
NUP50-205ENST00000419387 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 FCHSD1Q86WN1 690 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 IL31RAQ8NI17 732 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 PPTC7Q8NI37 304 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 PIBF1Q8WXW3 757 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 TMEM87BQ96K49 555 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 LZTS2Q9BRK4 669 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 MYL10Q9BUA6 226 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 SPZ1Q9BXG8 430 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 SLC4A7Q9Y6M7 1214 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
NUP50-205ENST00000419387 KIAA1217Q5T5P2 1943 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 CCDC69A6NI79 296 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 HAS3O00219 553 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 SH2B2O14492 632 aaPredicted RBP10.9□□□□□ -0.66
NUP50-205ENST00000419387 PPFIA4O75335 1185 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 GGPS1O95749 300 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 ACTN1P12814 892 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 LIFRP42702 1097 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 PSEN2P49810 448 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 GNAQP50148 359 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 SP2Q02086 613 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 CELF3Q5SZQ8 465 aaKnown RBP10.9□□□□□ -0.66
NUP50-205ENST00000419387 CREB3L3Q68CJ9 461 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 NFXL1Q6ZNB6 911 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
NUP50-205ENST00000419387 SKAP1Q86WV1 359 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 C7orf31Q8N865 590 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 CAGE1Q8TC20 777 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 RRP36Q96EU6 259 aaKnown RBP10.9□□□□□ -0.66
NUP50-205ENST00000419387 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
NUP50-205ENST00000419387 SPATA33Q96N06 139 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 CTAGE1Q96RT6 745 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 ALG1Q9BT22 464 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 KATNAL1Q9BW62 490 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 NKX2-4Q9H2Z4 354 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 ANO2Q9NQ90 1003 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 HDAC6Q9UBN7 1215 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 GTF2IRD1Q9UHL9 959 aa10.9□□□□□ -0.66
NUP50-205ENST00000419387 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.66
NUP50-205ENST00000419387 STAM2O75886 525 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 F2P00734 622 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 CALM1P0DP23 149 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 CALM2P0DP24 149 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 CALM3P0DP25 149 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 HOXD8P13378 290 aaPredicted RBP10.89□□□□□ -0.67
NUP50-205ENST00000419387 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
NUP50-205ENST00000419387 RABGGTBP53611 331 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 COL9A3Q14050 684 aaPredicted RBP10.89□□□□□ -0.67
NUP50-205ENST00000419387 MFSD10Q14728 455 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 KIAA0753Q2KHM9 967 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 HSDL1Q3SXM5 330 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 BMP2KLQ5H9B9 411 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 IER5LQ5T953 404 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 ERICH6BQ5W0A0 696 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 SRBD1Q8N5C6 995 aaKnown RBP10.89□□□□□ -0.67
NUP50-205ENST00000419387 SMARCC2Q8TAQ2 1214 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 AFAP1L1Q8TED9 768 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
NUP50-205ENST00000419387 CUL5Q93034 780 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 GAS2L1Q99501 681 aaPredicted RBP10.89□□□□□ -0.67
NUP50-205ENST00000419387 FTOQ9C0B1 505 aaKnown RBP eCLIP10.89□□□□□ -0.67
NUP50-205ENST00000419387 PRDM12Q9H4Q4 367 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 MLXIPQ9HAP2 919 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 SLC28A3Q9HAS3 691 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 SEC63Q9UGP8 760 aaKnown RBP10.89□□□□□ -0.67
NUP50-205ENST00000419387 YBX2Q9Y2T7 364 aaKnown RBP10.89□□□□□ -0.67
NUP50-205ENST00000419387 PCDHA11Q9Y5I1 949 aa10.89□□□□□ -0.67
NUP50-205ENST00000419387 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 SORBS3O60504 671 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 PLEKHA8P1O95397 391 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 ZNF286BP0CG31 522 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 SELPP16109 830 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 RXRAP19793 462 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 UBA1P22314 1058 aaKnown RBP10.88□□□□□ -0.67
NUP50-205ENST00000419387 ICAM3P32942 547 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 MRPS9P82933 396 aaKnown RBP10.88□□□□□ -0.67
NUP50-205ENST00000419387 USP17L6PQ6QN14 398 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 PHOSPHO2Q8TCD6 241 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 DHX38Q92620 1227 aaKnown RBP10.88□□□□□ -0.67
NUP50-205ENST00000419387 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
NUP50-205ENST00000419387 LRRC2Q9BYS8 371 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 RTEL1Q9NZ71 1219 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 PCDHB13Q9Y5F0 798 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 SLC12A7Q9Y666 1083 aa10.88□□□□□ -0.67
NUP50-205ENST00000419387 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 MEIS2O14770 477 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 PARNO95453 639 aaKnown RBP10.87□□□□□ -0.67
NUP50-205ENST00000419387 CKBP12277 381 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 MYOGP15173 224 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 RBL2Q08999 1139 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 PTK7Q13308 1070 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms