RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TCRBV5S4A2TA0A5A2 114 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 ARVCFO00192 962 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 PPP1R12AO14974 1030 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 RAPGEF3O95398 923 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 C8BP07358 591 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 JAG1P78504 1218 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 SLC9A5Q14940 896 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 HABP4Q5JVS0 413 aaKnown RBP6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 STEAP3Q658P3 488 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 OTOP3Q7RTS5 596 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 MTDHQ86UE4 582 aaKnown RBP6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 ARRDC4Q8NCT1 418 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 AP5M1Q9H0R1 490 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 TRIM39Q9HCM9 518 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 TMEM260Q9NX78 707 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 ZNF652Q9Y2D9 606 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 TELO2Q9Y4R8 837 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 KCTD3Q9Y597 815 aa6.75□□□□□ -1.33
HMGB1P49-201ENST00000418882 ADAMTS20P59510 1910 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 DBX1A6NMT0 343 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 AQP7O14520 342 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 HGSO14964 777 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 DGKIO75912 1065 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 ZBTB7AO95365 584 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 LTFP02788 710 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 GUCY1A3Q02108 690 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 BRAPQ7Z569 592 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 AMIGO3Q86WK7 504 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 FAM129CQ86XR2 697 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 MIB1Q86YT6 1006 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 SH3RF2Q8TEC5 729 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 NOX5Q96PH1 765 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 CNOT6Q9ULM6 557 aaKnown RBP6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 IRAK3Q9Y616 596 aa6.74□□□□□ -1.33
HMGB1P49-201ENST00000418882 SLC27A2O14975 620 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 SRGAP2CP0DJJ0 459 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 NCAM1P13591 858 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 STAT5AP42229 794 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 TKFCQ3LXA3 575 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 ABHD17CQ6PCB6 329 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 ANKLE2Q86XL3 938 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 SMARCC2Q8TAQ2 1214 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 MRPL4Q9BYD3 311 aaKnown RBP6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 RNF38Q9H0F5 515 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 SLC6A20Q9NP91 592 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 MYOTQ9UBF9 498 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 CBLCQ9ULV8 474 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 WASF3Q9UPY6 502 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
HMGB1P49-201ENST00000418882 WNT9AO14904 365 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 KCNQ2O43526 872 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 PYGMP11217 842 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 KCNA6P17658 529 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 FOXO4P98177 505 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 CACNB2Q08289 660 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 PAK1Q13153 545 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 CR1LQ2VPA4 569 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 B3GNT8Q7Z7M8 397 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 LRRC56Q8IYG6 542 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 CLEC4DQ8WXI8 215 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 CPA5Q8WXQ8 436 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 DACT3Q96B18 629 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 ALG1Q9BT22 464 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 IRF2BPLQ9H1B7 796 aa6.72□□□□□ -1.33
HMGB1P49-201ENST00000418882 FAM47E-STBD1D6RA91 191 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 AMY2AP04746 511 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 CKMP06732 381 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 GNAT1P11488 350 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 YBX3P16989 372 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 PFKLP17858 780 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 AMY2BP19961 511 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 HTRA3P83110 453 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 TARBP2Q15633 366 aaKnown RBP6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 LCE3BQ5TA77 95 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 FSTL4Q6MZW2 842 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 ETV3LQ6ZN32 361 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 LCNL1Q6ZST4 164 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 FAM126BQ8IXS8 530 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 NLGN1Q8N2Q7 840 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 UHMK1Q8TAS1 419 aaKnown RBP6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 DDX11Q96FC9 970 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 CD244Q9BZW8 370 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 SMOC1Q9H4F8 434 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 RBPJLQ9UBG7 517 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 ASH2LQ9UBL3 628 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 COQ6Q9Y2Z9 468 aa6.71□□□□□ -1.34
HMGB1P49-201ENST00000418882 CCDC163A0A0D9SF12 145 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 TCRBV16S1A1N1A0A5B0 115 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 PLD2O14939 933 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 NUAK1O60285 661 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 ASMTLO95671 621 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 SDSP20132 328 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 DLX2Q07687 328 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 CHRNA2Q15822 529 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 C21orf62-AS1Q17RA5 79 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 VMACQ2NL98 169 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 CNKSR3Q6P9H4 555 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 501.8 ms