RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 OR6J1Q8NGC5 347 aa25.56■■□□□ 1.68
PTCD3-203ENST00000409783 MOXD2PA6NHM9 499 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 FIBPO43427 364 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 GH1P01241 217 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 ASGR1P07306 291 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 CYP3A4P08684 503 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 UBA1P22314 1058 aaKnown RBP25.55■■□□□ 1.68
PTCD3-203ENST00000409783 ARHGAP4P98171 946 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 GNPTABQ3T906 1256 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 PCSK9Q8NBP7 692 aaKnown RBP25.55■■□□□ 1.68
PTCD3-203ENST00000409783 EMID1Q96A84 441 aaPredicted RBP25.55■■□□□ 1.68
PTCD3-203ENST00000409783 FERMT2Q96AC1 680 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 GPRASP2Q96D09 838 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 BCAS3Q9H6U6 928 aa25.55■■□□□ 1.68
PTCD3-203ENST00000409783 PDE4DIPQ5VU43 2346 aa25.54■■□□□ 1.68
PTCD3-203ENST00000409783 A0A1W2PQ45 241 aaPredicted RBP25.54■■□□□ 1.68
PTCD3-203ENST00000409783 A0A1W2PQY0 241 aa25.54■■□□□ 1.68
PTCD3-203ENST00000409783 A6NJR5 290 aa25.54■■□□□ 1.68
PTCD3-203ENST00000409783 CYP2W1Q8TAV3 490 aa25.54■■□□□ 1.68
PTCD3-203ENST00000409783 MXRA8Q9BRK3 442 aa25.54■■□□□ 1.68
PTCD3-203ENST00000409783 JADE2Q9NQC1 790 aa25.54■■□□□ 1.68
PTCD3-203ENST00000409783 XBP1P17861 261 aa25.53■■□□□ 1.68
PTCD3-203ENST00000409783 CELF3Q5SZQ8 465 aaKnown RBP25.53■■□□□ 1.68
PTCD3-203ENST00000409783 MYSM1Q5VVJ2 828 aa25.53■■□□□ 1.68
PTCD3-203ENST00000409783 NLRX1Q86UT6 975 aa25.53■■□□□ 1.68
PTCD3-203ENST00000409783 OXER1Q8TDS5 423 aa25.53■■□□□ 1.68
PTCD3-203ENST00000409783 HTATIP2Q9BUP3 242 aa25.53■■□□□ 1.68
PTCD3-203ENST00000409783 CPT1AP50416 773 aa25.52■■□□□ 1.68
PTCD3-203ENST00000409783 HMGN5P82970 282 aaKnown RBP25.52■■□□□ 1.68
PTCD3-203ENST00000409783 SNX17Q15036 470 aa25.52■■□□□ 1.68
PTCD3-203ENST00000409783 LRRC26Q2I0M4 334 aa25.52■■□□□ 1.68
PTCD3-203ENST00000409783 CEP55Q53EZ4 464 aa25.52■■□□□ 1.68
PTCD3-203ENST00000409783 AFG1LQ8WV93 481 aa25.52■■□□□ 1.68
PTCD3-203ENST00000409783 DNAH12Q6ZR08 3092 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 FAM86B1E9PN63 330 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 MEIS1O00470 390 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 ATP9AO75110 1047 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 GGPS1O95749 300 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 FAM86B2P0C5J1 330 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 LAMC2Q13753 1193 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 KRT40Q6A162 431 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 CXCL17Q6UXB2 119 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 SLC39A5Q6ZMH5 540 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 DHX37Q8IY37 1157 aaKnown RBP25.51■■□□□ 1.67
PTCD3-203ENST00000409783 SENP7Q9BQF6 1050 aa25.51■■□□□ 1.67
PTCD3-203ENST00000409783 IGLV3-22A0A075B6J6 115 aa25.5■■□□□ 1.67
PTCD3-203ENST00000409783 MAFGO15525 162 aa25.5■■□□□ 1.67
PTCD3-203ENST00000409783 KCNA2P16389 499 aa25.5■■□□□ 1.67
PTCD3-203ENST00000409783 CIITAP33076 1130 aa25.5■■□□□ 1.67
PTCD3-203ENST00000409783 ATN1P54259 1190 aaPredicted RBP25.5■■□□□ 1.67
PTCD3-203ENST00000409783 MTMR1Q13613 665 aa25.5■■□□□ 1.67
PTCD3-203ENST00000409783 TNFRSF25Q93038 417 aa25.5■■□□□ 1.67
PTCD3-203ENST00000409783 CDHR1Q96JP9 859 aa25.5■■□□□ 1.67
PTCD3-203ENST00000409783 SCN10AQ9Y5Y9 1956 aa25.5■■□□□ 1.67
PTCD3-203ENST00000409783 ELP1O95163 1332 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 ZEB2O60315 1214 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 MMP1P03956 469 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 MMP3P08254 477 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 ARP10275 920 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 HOXD8P13378 290 aaPredicted RBP25.49■■□□□ 1.67
PTCD3-203ENST00000409783 PURAQ00577 322 aaKnown RBP25.49■■□□□ 1.67
PTCD3-203ENST00000409783 NEDD9Q14511 834 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 HSDL1Q3SXM5 330 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 C1orf53Q5VUE5 145 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 NIPA1Q7RTP0 329 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 PPTC7Q8NI37 304 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 TBCKQ8TEA7 893 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 KCNH7Q9NS40 1196 aa25.49■■□□□ 1.67
PTCD3-203ENST00000409783 SORBS3O60504 671 aa25.48■■□□□ 1.67
PTCD3-203ENST00000409783 FOSBP53539 338 aa25.48■■□□□ 1.67
PTCD3-203ENST00000409783 KRT25Q7Z3Z0 450 aa25.48■■□□□ 1.67
PTCD3-203ENST00000409783 GLT1D1Q96MS3 346 aa25.48■■□□□ 1.67
PTCD3-203ENST00000409783 STARD7Q9NQZ5 370 aa25.48■■□□□ 1.67
PTCD3-203ENST00000409783 POLR3EQ9NVU0 708 aa25.48■■□□□ 1.67
PTCD3-203ENST00000409783 TELO2Q9Y4R8 837 aa25.48■■□□□ 1.67
PTCD3-203ENST00000409783 GRIN2DO15399 1336 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 CABYRO75952 493 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 USP11P51784 963 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 NR5A1Q13285 461 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 CUL4AQ13619 759 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 EARS2Q5JPH6 523 aaKnown RBP25.47■■□□□ 1.67
PTCD3-203ENST00000409783 METTL7BQ6UX53 244 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 CYFIP1Q7L576 1253 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 LENG9Q96B70 501 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 SPATA33Q96N06 139 aa25.47■■□□□ 1.67
PTCD3-203ENST00000409783 MYL3P08590 195 aa25.46■■□□□ 1.67
PTCD3-203ENST00000409783 KRT2P35908 639 aa25.46■■□□□ 1.67
PTCD3-203ENST00000409783 ZNF76P36508 570 aa25.46■■□□□ 1.67
PTCD3-203ENST00000409783 RTP1P59025 263 aa25.46■■□□□ 1.67
PTCD3-203ENST00000409783 NONOQ15233 471 aaKnown RBP eCLIP25.46■■□□□ 1.67
PTCD3-203ENST00000409783 BRDTQ58F21 947 aaPredicted RBP25.46■■□□□ 1.67
PTCD3-203ENST00000409783 PLA2G4DQ86XP0 818 aa25.46■■□□□ 1.67
PTCD3-203ENST00000409783 SLC43A3Q8NBI5 491 aa25.46■■□□□ 1.67
PTCD3-203ENST00000409783 C8orf76Q96K31 380 aa25.46■■□□□ 1.67
PTCD3-203ENST00000409783 MLXIPQ9HAP2 919 aa25.46■■□□□ 1.67
PTCD3-203ENST00000409783 AGO4Q9HCK5 861 aaKnown RBP25.46■■□□□ 1.67
PTCD3-203ENST00000409783 FAM205CA6NFA0 338 aa25.45■■□□□ 1.66
PTCD3-203ENST00000409783 BTBD18B2RXH4 712 aa25.45■■□□□ 1.66
PTCD3-203ENST00000409783 KPNA6O60684 536 aa25.45■■□□□ 1.66
PTCD3-203ENST00000409783 CDK7P50613 346 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms