RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 LSM14BQ9BX40 385 aaKnown RBP14.8□□□□□ -0.04
COL6A2-204ENST00000409416 RTFDC1Q9BY42 306 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-204ENST00000409416 IFIH1Q9BYX4 1025 aaKnown RBP14.8□□□□□ -0.04
COL6A2-204ENST00000409416 TMOD2Q9NZR1 351 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 LRP6O75581 1613 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 DDTLA6NHG4 134 aaPredicted RBP14.79□□□□□ -0.04
COL6A2-204ENST00000409416 RNF40O75150 1001 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 PCP11498 1178 aaKnown RBP14.79□□□□□ -0.04
COL6A2-204ENST00000409416 GRM4Q14833 912 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 FOXR1Q6PIV2 292 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 LARGE2Q8N3Y3 721 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 LCMT1Q9UIC8 334 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 PDHBP11177 359 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 HARSP12081 509 aaKnown RBP14.79□□□□□ -0.04
COL6A2-204ENST00000409416 ACTN1P12814 892 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 TM4SF1P30408 202 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 ECE1P42892 770 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 GUCY2FP51841 1108 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 MRPL12P52815 198 aaKnown RBP14.79□□□□□ -0.04
COL6A2-204ENST00000409416 GFPT1Q06210 699 aaPredicted RBP14.79□□□□□ -0.04
COL6A2-204ENST00000409416 WDR59Q6PJI9 974 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 EXOC4Q96A65 974 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 PCIF1Q9H4Z3 704 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 ZNF277Q9NRM2 450 aaPredicted RBP14.79□□□□□ -0.04
COL6A2-204ENST00000409416 PANK4Q9NVE7 773 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 BICDL2A1A5D9 508 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 USO1O60763 962 aaKnown RBP14.79□□□□□ -0.04
COL6A2-204ENST00000409416 EIF4A3P38919 411 aaKnown RBP14.79□□□□□ -0.04
COL6A2-204ENST00000409416 QRICH1Q2TAL8 776 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 MAP9Q49MG5 647 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 CDC42EP5Q6NZY7 148 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 LRRC15Q8TF66 581 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 FBXO28Q9NVF7 368 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 CAPN11Q9UMQ6 739 aa14.79□□□□□ -0.04
COL6A2-204ENST00000409416 MYH13Q9UKX3 1938 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 LRRC10BA6NIK2 292 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 MAP2K7O14733 419 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 BRD2P25440 801 aaKnown RBP14.78□□□□□ -0.04
COL6A2-204ENST00000409416 MAGEA1P43355 309 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 CRKP46108 304 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 NSMFQ6X4W1 530 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 SND1Q7KZF4 910 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL6A2-204ENST00000409416 FAM114A1Q8IWE2 563 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 C4orf32Q8N8J7 132 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 FAM133AQ8N9E0 248 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 UHMK1Q8TAS1 419 aaKnown RBP14.78□□□□□ -0.04
COL6A2-204ENST00000409416 THAP9Q9H5L6 903 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 PLCG2P16885 1265 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 ACTN2P35609 894 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 GJC1P36383 396 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 TUBB2AQ13885 445 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 TTI2Q6NXR4 508 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 TEX2Q8IWB9 1127 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 CDAN1Q8IWY9 1227 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 MSANTD4Q8NCY6 345 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 CUL5Q93034 780 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 FAM84AQ96KN4 292 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 RUFY1Q96T51 708 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 TUBB2BQ9BVA1 445 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 TRIM9Q9C026 710 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 TTLL1O95922 423 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 CCNE1P24864 410 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 CKAP4Q07065 602 aaKnown RBP14.78□□□□□ -0.04
COL6A2-204ENST00000409416 EZH2Q15910 746 aaKnown RBP14.78□□□□□ -0.04
COL6A2-204ENST00000409416 CDC37Q16543 378 aaPredicted RBP14.78□□□□□ -0.04
COL6A2-204ENST00000409416 KCTD16Q68DU8 428 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 DUSP9Q99956 384 aaKnown RBP14.78□□□□□ -0.04
COL6A2-204ENST00000409416 FGFBP2Q9BYJ0 223 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 BHMT2Q9H2M3 363 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 MYO1AQ9UBC5 1043 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 ADAMTS1Q9UHI8 967 aa14.78□□□□□ -0.04
COL6A2-204ENST00000409416 EPHB6O15197 1021 aa14.77□□□□□ -0.04
COL6A2-204ENST00000409416 KLRC4O43908 158 aa14.77□□□□□ -0.04
COL6A2-204ENST00000409416 LRRN2O75325 713 aa14.77□□□□□ -0.04
COL6A2-204ENST00000409416 TBCAO75347 108 aaKnown RBP14.77□□□□□ -0.04
COL6A2-204ENST00000409416 SSR1P43307 286 aaKnown RBP14.77□□□□□ -0.04
COL6A2-204ENST00000409416 EN1Q05925 392 aaPredicted RBP14.77□□□□□ -0.04
COL6A2-204ENST00000409416 GIMAP8Q8ND71 665 aaPredicted RBP14.77□□□□□ -0.04
COL6A2-204ENST00000409416 EHBP1Q8NDI1 1231 aa14.77□□□□□ -0.04
COL6A2-204ENST00000409416 RSPH10B2B2RC85 870 aa14.77□□□□□ -0.05
COL6A2-204ENST00000409416 TACC1O75410 805 aa14.77□□□□□ -0.05
COL6A2-204ENST00000409416 RSPH10BP0C881 870 aa14.77□□□□□ -0.05
COL6A2-204ENST00000409416 MS4A14Q96JA4 679 aa14.77□□□□□ -0.05
COL6A2-204ENST00000409416 ZNF668Q96K58 619 aaPredicted RBP14.77□□□□□ -0.05
COL6A2-204ENST00000409416 MTMR4Q9NYA4 1195 aa14.77□□□□□ -0.05
COL6A2-204ENST00000409416 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
COL6A2-204ENST00000409416 LOC102724159A0A0B4J2E5 919 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 H0YIN7 160 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 ATP2C2O75185 946 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 SSTR3P32745 418 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 USP14P54578 494 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 PWP2Q15269 919 aaKnown RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 FAM26FQ5R3K3 315 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 NFRKBQ6P4R8 1299 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 MYCT1Q8N699 235 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 GOLGA5Q8TBA6 731 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 AFAP1L1Q8TED9 768 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 RAB21Q9UL25 225 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms