RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 PCDHA12Q9UN75 941 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 POLR2FP61218 127 aaKnown RBP13.05□□□□□ -0.32
ITSN1-211ENST00000399355 PDE4CQ08493 712 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 ZNF543Q08ER8 600 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 KCNMA1Q12791 1236 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 ZC2HC1CQ53FD0 456 aaPredicted RBP13.05□□□□□ -0.32
ITSN1-211ENST00000399355 ADAT2Q7Z6V5 191 aaKnown RBP13.05□□□□□ -0.32
ITSN1-211ENST00000399355 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 DEF6Q9H4E7 631 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 SCN9AQ15858 1988 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 GH2P01242 217 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CCNE1P24864 410 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 DCAF17Q5H9S7 520 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-211ENST00000399355 TMTC1Q8IUR5 882 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 ANKRD20A12PQ8NF67 263 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 MTA3Q9BTC8 594 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CCSER1Q9C0I3 900 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 ZBTB21Q9ULJ3 1066 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 AHDC1Q5TGY3 1603 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-211ENST00000399355 TLR2O60603 784 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 SRGNP10124 158 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CTTNQ14247 550 aaKnown RBP13.04□□□□□ -0.32
ITSN1-211ENST00000399355 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 FAM133AQ8N9E0 248 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CALML4Q96GE6 196 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
ITSN1-211ENST00000399355 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 A0A0U1RQG5 324 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 AKR1B10O60218 316 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 SLC9A1P19634 815 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 GABPAQ06546 454 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
ITSN1-211ENST00000399355 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 HTTP42858 3142 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 LDHCP07864 332 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 MYBP10242 640 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 CRKP46108 304 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 GSTO1P78417 241 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 COASYQ13057 564 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 TCERG1LQ5VWI1 586 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 LRRC1Q9BTT6 524 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 HOMER2Q9NSB8 354 aa13.04□□□□□ -0.32
ITSN1-211ENST00000399355 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-211ENST00000399355 EML1O00423 815 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 BMP15O95972 392 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 CALCAP01258 141 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 KRT18P05783 430 aaKnown RBP13.03□□□□□ -0.32
ITSN1-211ENST00000399355 GNA11P29992 359 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 COPB2P35606 906 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 ARSHQ5FYA8 562 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 GPBP1Q86WP2 473 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 IFIH1Q9BYX4 1025 aaKnown RBP13.03□□□□□ -0.32
ITSN1-211ENST00000399355 RIOX1Q9H6W3 641 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 ACP6Q9NPH0 428 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 ARGLU1Q9NWB6 273 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-211ENST00000399355 ADAM21Q9UKJ8 722 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 CAPN11Q9UMQ6 739 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 TRIM66O15016 1216 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 PEX10O60683 326 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 TTLL1O95922 423 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 KIF11P52732 1056 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-211ENST00000399355 FAM182AQ5T1J6 154 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 KRT25Q7Z3Z0 450 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 RMND1Q9NWS8 449 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 DLEC1Q9Y238 1755 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 LTBP4Q8N2S1 1624 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 CFBP00751 764 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 CASP8Q14790 479 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
ITSN1-211ENST00000399355 STIM1Q13586 685 aa13.02□□□□□ -0.32
ITSN1-211ENST00000399355 RAPGEF1Q13905 1077 aa13.02□□□□□ -0.32
ITSN1-211ENST00000399355 CCDC40Q4G0X9 1142 aa13.02□□□□□ -0.32
ITSN1-211ENST00000399355 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.32
ITSN1-211ENST00000399355 LRRC55Q6ZSA7 311 aa13.02□□□□□ -0.32
ITSN1-211ENST00000399355 RABGGTAQ92696 567 aa13.02□□□□□ -0.32
ITSN1-211ENST00000399355 DNAJC19Q96DA6 116 aa13.02□□□□□ -0.32
ITSN1-211ENST00000399355 DNAJC7Q99615 494 aa13.02□□□□□ -0.32
ITSN1-211ENST00000399355 C21orf2O43822 256 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 ATP2B4P23634 1241 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 KRT79Q5XKE5 535 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 PANK4Q9NVE7 773 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 VGLL3A8MV65 326 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 CCP110O43303 1012 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 APBA3O96018 575 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 PCP11498 1178 aaKnown RBP13.02□□□□□ -0.33
ITSN1-211ENST00000399355 GNAQP50148 359 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 KCTD16Q68DU8 428 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 CACNA2D4Q7Z3S7 1137 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 RAD54LQ92698 747 aa13.02□□□□□ -0.33
ITSN1-211ENST00000399355 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms