RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CCDC170Q8IYT3 715 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 SLC35F6Q8N357 371 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 GPR161Q8N6U8 529 aaKnown RBP18.67■□□□□ 0.58
NUP50-202ENST00000396096 LENG9Q96B70 501 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 GMLQ99445 158 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 PSMD1Q99460 953 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 NDST4Q9H3R1 872 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 HAUS4Q9H6D7 363 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 AGPAT5Q9NUQ2 364 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 ZNHIT6Q9NWK9 470 aaKnown RBP18.67■□□□□ 0.58
NUP50-202ENST00000396096 KIAA1024Q9UPX6 916 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 SIK3Q9Y2K2 1263 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 PCDHA2Q9Y5H9 948 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 PITPNM2Q9BZ72 1349 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 FRMD3A2A2Y4 597 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 CYP3A4P08684 503 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 KLK7P49862 253 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 CBX1P83916 185 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 CCDC65Q8IXS2 484 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 UBE2Q2Q8WVN8 375 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 FAM151AQ8WW52 585 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 RABGGTAQ92696 567 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 EEF2KMTQ96G04 330 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 FAM20AQ96MK3 541 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.66■□□□□ 0.58
NUP50-202ENST00000396096 ARGLU1Q9NWB6 273 aaPredicted RBP18.66■□□□□ 0.58
NUP50-202ENST00000396096 ZNF446Q9NWS9 450 aa18.66■□□□□ 0.58
NUP50-202ENST00000396096 POTEB3A0JP26 581 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 SPDYE3A6NKU9 549 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 POTECB2RU33 542 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 E9PMD0 336 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 OPLAHO14841 1288 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 C21orf2O43822 256 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 VIL1P09327 827 aaKnown RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 CLCN6P51797 869 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 KRT83P78385 493 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 POTEBQ6S5H4 581 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 SMAP1Q8IYB5 467 aaPredicted RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 RTKN2Q8IZC4 609 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 NAPGQ99747 312 aaPredicted RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 ARHGEF10LQ9HCE6 1279 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 PRR12Q9ULL5 1215 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 EIF3CLB5ME19 914 aaKnown RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 NKRFO15226 690 aaKnown RBP eCLIP18.65■□□□□ 0.58
NUP50-202ENST00000396096 MED24O75448 989 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 ABL1P00519 1130 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 CYP11B2P19099 503 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 CYLC1P35663 651 aaPredicted RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 SNAP25P60880 206 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 HERVK_113P62684 666 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 EZH2Q15910 746 aaKnown RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 SRGAP1Q7Z6B7 1085 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 CCDC84Q86UT8 332 aaPredicted RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 CEP112Q8N8E3 955 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 GLIS3Q8NEA6 775 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 ERMNQ8TAM6 284 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 GOLGA1Q92805 767 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 CEP63Q96MT8 703 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 EIF3CQ99613 913 aaKnown RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 ZNF70Q9UC06 446 aaPredicted RBP18.65■□□□□ 0.58
NUP50-202ENST00000396096 TMX2Q9Y320 296 aa18.65■□□□□ 0.58
NUP50-202ENST00000396096 SLC12A3P55017 1021 aa18.64■□□□□ 0.57
NUP50-202ENST00000396096 TUBB4BP68371 445 aa18.64■□□□□ 0.57
NUP50-202ENST00000396096 FKBP3Q00688 224 aaKnown RBP18.64■□□□□ 0.57
NUP50-202ENST00000396096 LRRC41Q15345 812 aa18.64■□□□□ 0.57
NUP50-202ENST00000396096 USH1GQ495M9 461 aa18.64■□□□□ 0.57
NUP50-202ENST00000396096 PRR16Q569H4 304 aa18.64■□□□□ 0.57
NUP50-202ENST00000396096 FKBP1CQ5VVH2 108 aa18.64■□□□□ 0.57
NUP50-202ENST00000396096 GPBP1Q86WP2 473 aa18.64■□□□□ 0.57
NUP50-202ENST00000396096 HDAC9Q9UKV0 1011 aa18.64■□□□□ 0.57
NUP50-202ENST00000396096 CNTNAP1P78357 1384 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 KIF20AO95235 890 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 RPA1P27694 616 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 STAT3P40763 770 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 KIF4BQ2VIQ3 1234 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 ARHGAP27Q6ZUM4 889 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 ZC3H3Q8IXZ2 948 aaKnown RBP18.63■□□□□ 0.57
NUP50-202ENST00000396096 KCTD17Q8N5Z5 321 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 TTLL6Q8N841 843 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 PCMTD1Q96MG8 357 aaPredicted RBP18.63■□□□□ 0.57
NUP50-202ENST00000396096 EDEM3Q9BZQ6 932 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 VPS33BQ9H267 617 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 ATAD5Q96QE3 1844 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 FAM86B1E9PN63 330 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 FAM86B2P0C5J1 330 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 STAT2P52630 851 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 MARSP56192 900 aaKnown RBP18.63■□□□□ 0.57
NUP50-202ENST00000396096 NHEJ1Q9H9Q4 299 aaPredicted RBP18.63■□□□□ 0.57
NUP50-202ENST00000396096 GOPCQ9HD26 462 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 PLAGL2Q9UPG8 496 aa18.63■□□□□ 0.57
NUP50-202ENST00000396096 COL4A5P29400 1685 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 TCP10L2B9ZVM9 353 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 PSMD14O00487 310 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 TBC1D12O60347 775 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 ZRANB2O95218 330 aaKnown RBP eCLIP18.62■□□□□ 0.57
NUP50-202ENST00000396096 GNA14O95837 355 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 SSBP05455 408 aaKnown RBP eCLIP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms