RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 C16orf59Q7L2K0 433 aa15.81■□□□□ 0.12
CXCL12-205ENST00000395794 NLRX1Q86UT6 975 aa15.81■□□□□ 0.12
CXCL12-205ENST00000395794 ZFP91Q96JP5 570 aaPredicted RBP15.81■□□□□ 0.12
CXCL12-205ENST00000395794 EHMT1Q9H9B1 1298 aa15.81■□□□□ 0.12
CXCL12-205ENST00000395794 FRMPD4Q14CM0 1322 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 KLF18A0A0U1RQI7 1052 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 SPDYE3A6NKU9 549 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 GOLGA8AA7E2F4 631 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 GOLGA8BA8MQT2 603 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 NOP56O00567 594 aaKnown RBP15.8■□□□□ 0.12
CXCL12-205ENST00000395794 FIBPO43427 364 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 SORBS3O60504 671 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 PFKMP08237 780 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 UBA1P22314 1058 aaKnown RBP15.8■□□□□ 0.12
CXCL12-205ENST00000395794 RFC2P35250 354 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 PSEN2P49810 448 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 MFSD10Q14728 455 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 PCNX4Q63HM2 1172 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 BLOC1S2Q6QNY1 142 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 SESTD1Q86VW0 696 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 PPP1R13LQ8WUF5 828 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 HERVK_113Q902F9 699 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 JAKMIP1Q96N16 626 aaKnown RBP15.8■□□□□ 0.12
CXCL12-205ENST00000395794 ALG1Q9BT22 464 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 WNT8AQ9H1J5 351 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 RTEL1Q9NZ71 1219 aa15.8■□□□□ 0.12
CXCL12-205ENST00000395794 TMEM265A0A087WTH1 108 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 CCDC196A0A1B0GTZ2 297 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 SPATA31C2B4DYI2 1134 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 PITPNM1O00562 1244 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 MEIS2O14770 477 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 ZNF286BP0CG31 522 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 PSMA5P28066 241 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 ICAM3P32942 547 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 HSPA4P34932 840 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 MRPS9P82933 396 aaKnown RBP15.79■□□□□ 0.12
CXCL12-205ENST00000395794 KIAA0753Q2KHM9 967 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 HSDL1Q3SXM5 330 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 OTOP2Q7RTS6 562 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 GIMAP8Q8ND71 665 aaPredicted RBP15.79■□□□□ 0.12
CXCL12-205ENST00000395794 KAT2BQ92831 832 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 SCLYQ96I15 445 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 INPP4AQ96PE3 977 aaPredicted RBP15.79■□□□□ 0.12
CXCL12-205ENST00000395794 SEMA6BQ9H3T3 888 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 BRPF3Q9ULD4 1205 aa15.79■□□□□ 0.12
CXCL12-205ENST00000395794 F2P00734 622 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 ACTN1P12814 892 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 RCAN1P53805 252 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 NAPAP54920 295 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 SP2Q02086 613 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 DEFB128Q7Z7B8 93 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 TEX2Q8IWB9 1127 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 CAGE1Q8TC20 777 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 GPKOWQ92917 476 aaPredicted RBP eCLIP15.78■□□□□ 0.12
CXCL12-205ENST00000395794 KCNB2Q92953 911 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 CDHR1Q96JP9 859 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 HDAC6Q9UBN7 1215 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 SNX14Q9Y5W7 946 aa15.78■□□□□ 0.12
CXCL12-205ENST00000395794 V9GY48 417 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-205ENST00000395794 ZBBXA8MT70 800 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 DNAJB2P25686 324 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 METAP2P50579 478 aaKnown RBP eCLIP15.77■□□□□ 0.12
CXCL12-205ENST00000395794 RASIP1Q5U651 963 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 GDF6Q6KF10 455 aaPredicted RBP15.77■□□□□ 0.12
CXCL12-205ENST00000395794 PPP1R18Q6NYC8 613 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 METTL7BQ6UX53 244 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 Q6ZUG5 572 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 CYFIP1Q7L576 1253 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 SLC17A8Q8NDX2 589 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 TIFAQ96CG3 184 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 FTOQ9C0B1 505 aaKnown RBP eCLIP15.77■□□□□ 0.12
CXCL12-205ENST00000395794 GLT8D2Q9H1C3 349 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 PPP4R2Q9NY27 417 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 GTF2IRD1Q9UHL9 959 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 MSRAQ9UJ68 235 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 SLC4A7Q9Y6M7 1214 aa15.77■□□□□ 0.12
CXCL12-205ENST00000395794 KIAA1217Q5T5P2 1943 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 BAZ2BQ9UIF8 2168 aaKnown RBP15.76■□□□□ 0.11
CXCL12-205ENST00000395794 CNTNAP5Q8WYK1 1306 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 hCG_1984214I3L0E3 225 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 IQCF3P0C7M6 154 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 HOXD8P13378 290 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-205ENST00000395794 CPA1P15085 419 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 ADCY7P51828 1080 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 RAB30Q15771 203 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 UBE2SQ16763 222 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 ERICH6BQ5W0A0 696 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 WWC2Q6AWC2 1192 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 ZNF713Q8N859 430 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-205ENST00000395794 AFAP1L1Q8TED9 768 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 BRF1Q92994 677 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 GUCD1Q96NT3 240 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 CDX2Q99626 313 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-205ENST00000395794 SENP7Q9BQF6 1050 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 USP26Q9BXU7 913 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 PCDHA6Q9UN73 950 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 PCDHA8Q9Y5H6 950 aa15.76■□□□□ 0.11
CXCL12-205ENST00000395794 H3BRB1 525 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms