RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TCP10Q12799 353 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 BMS1Q14692 1282 aaKnown RBP17.14■□□□□ 0.33
CPSF7-202ENST00000394888 KIAA0825Q8IV33 1275 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 GMCL1P1Q8NEA9 526 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 SCFD1Q8WVM8 642 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 NOC4LQ9BVI4 516 aaKnown RBP17.14■□□□□ 0.33
CPSF7-202ENST00000394888 ZNFX1Q9P2E3 1918 aaKnown RBP17.14■□□□□ 0.33
CPSF7-202ENST00000394888 POTEB3A0JP26 581 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 POTECB2RU33 542 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 CYP27A1Q02318 531 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 CDC37Q16543 378 aaPredicted RBP17.14■□□□□ 0.33
CPSF7-202ENST00000394888 POTEBQ6S5H4 581 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 EPM2AIP1Q7L775 607 aaPredicted RBP17.14■□□□□ 0.33
CPSF7-202ENST00000394888 CALML4Q96GE6 196 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 MMS19Q96T76 1030 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 CNTNAP1P78357 1384 aa17.13■□□□□ 0.33
CPSF7-202ENST00000394888 CAPN6Q9Y6Q1 641 aa17.13■□□□□ 0.33
CPSF7-202ENST00000394888 RLFQ13129 1914 aa17.13■□□□□ 0.33
CPSF7-202ENST00000394888 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
CPSF7-202ENST00000394888 RASSF8Q8NHQ8 419 aa17.13■□□□□ 0.33
CPSF7-202ENST00000394888 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
CPSF7-202ENST00000394888 DCAF4Q8WV16 495 aa17.13■□□□□ 0.33
CPSF7-202ENST00000394888 MYO6Q9UM54 1294 aa17.13■□□□□ 0.33
CPSF7-202ENST00000394888 ATP8B1O43520 1251 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 ATP2B2Q01814 1243 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 IGLV3-22A0A075B6J6 115 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 CCDC151A5D8V7 595 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 HDLBPQ00341 1268 aaKnown RBP17.12■□□□□ 0.33
CPSF7-202ENST00000394888 LRRC63Q05C16 580 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 STIM1Q13586 685 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 LONRF2Q1L5Z9 754 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 BTNL9Q6UXG8 535 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 GMCL1Q96IK5 515 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 ANO3Q9BYT9 981 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 HAUS4Q9H6D7 363 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 GUCA1BQ9UMX6 200 aa17.12■□□□□ 0.33
CPSF7-202ENST00000394888 ZCCHC17Q9NP64 241 aaKnown RBP17.12■□□□□ 0.33
CPSF7-202ENST00000394888 ZNF185O15231 689 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 Q4G0T1 1027 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 ZNF572Q7Z3I7 529 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-202ENST00000394888 CCDC170Q8IYT3 715 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 CYP2W1Q8TAV3 490 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 CCDC17Q96LX7 622 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 RBAK-RBAKDNI3L0D1 243 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 NDUFB10O96000 172 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 GCFC2P16383 781 aaKnown RBP17.11■□□□□ 0.33
CPSF7-202ENST00000394888 PDE6BP35913 854 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 PPP1R2P41236 205 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 USP11P51784 963 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 AMPD3Q01432 767 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 PSMD2Q13200 908 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 MAN2A1Q16706 1144 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 WHAMMP3Q1A5X7 153 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 MOXD1Q6UVY6 613 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 CATSPER3Q86XQ3 398 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 NUP58Q9BVL2 599 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 SERPINA10Q9UK55 444 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 TPM1P09493 284 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 ERCC3P19447 782 aa17.11■□□□□ 0.33
CPSF7-202ENST00000394888 LRRC53A6NM62 1247 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 GDF11O95390 407 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 CHRNA5P30532 468 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-202ENST00000394888 TMCO3Q6UWJ1 677 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 TRIM59Q8IWR1 403 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 CDAN1Q8IWY9 1227 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 PCDHA1Q9Y5I3 950 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 ZMYM2Q9UBW7 1377 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 POTEIP0CG38 1075 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 TUBB2AQ13885 445 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 POTEEQ6S8J3 1075 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 ANKRD20A12PQ8NF67 263 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 PRMT6Q96LA8 375 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-202ENST00000394888 TUBB2BQ9BVA1 445 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 PI4KBQ9UBF8 816 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 F5H6K3 240 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 SREBF1P36956 1147 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 KLRC3Q07444 240 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 CERKLQ49MI3 558 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-202ENST00000394888 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 STYK1Q6J9G0 422 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 CEP112Q8N8E3 955 aa17.1■□□□□ 0.33
CPSF7-202ENST00000394888 DHX36Q9H2U1 1008 aaKnown RBP17.1■□□□□ 0.33
CPSF7-202ENST00000394888 ZHX1Q9UKY1 873 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-202ENST00000394888 MPHOSPH10O00566 681 aaKnown RBP17.09■□□□□ 0.33
CPSF7-202ENST00000394888 AOC3Q16853 763 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 WDR93Q6P2C0 686 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 SLC30A10Q6XR72 485 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 CREG2Q8IUH2 290 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms