RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 GOLGA6L7A0A1B0GV03 622 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 ZNF233A6NK53 670 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 AMPD3Q01432 767 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 ECM1Q16610 540 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 FAM83BQ5T0W9 1011 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 KLHDC7AQ5VTJ3 777 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 SFMBT2Q5VUG0 894 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 KRT79Q5XKE5 535 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 CASKIN2Q8WXE0 1202 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 DHTKD1Q96HY7 919 aaPredicted RBP18.45■□□□□ 0.54
SIPA1-201ENST00000394224 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.45■□□□□ 0.54
SIPA1-201ENST00000394224 C4AP0C0L4 1744 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 C4BP0C0L5 1744 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 DCDC2CA8MYV0 355 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 NR1D1P20393 614 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 IFFO1Q0D2I5 559 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 ZNF211Q13398 564 aaPredicted RBP18.44■□□□□ 0.54
SIPA1-201ENST00000394224 AENQ8WTP8 325 aaKnown RBP18.44■□□□□ 0.54
SIPA1-201ENST00000394224 MLXIPLQ9NP71 852 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 RPSAP08865 295 aaKnown RBP18.44■□□□□ 0.54
SIPA1-201ENST00000394224 ITGA4P13612 1032 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 SLC9A1P19634 815 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 CTNNA1P35221 906 aaKnown RBP18.44■□□□□ 0.54
SIPA1-201ENST00000394224 FLT3P36888 993 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 SLC9C1Q4G0N8 1177 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 ARL6IP4Q66PJ3 421 aaKnown RBP18.44■□□□□ 0.54
SIPA1-201ENST00000394224 TBC1D31Q96DN5 1066 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 NUP58Q9BVL2 599 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 ZNF219Q9P2Y4 722 aaPredicted RBP18.44■□□□□ 0.54
SIPA1-201ENST00000394224 AKAP11Q9UKA4 1901 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 A0A1W2PQC6 194 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 IFNAR2P48551 515 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 EPHB4P54760 987 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 TEX11Q8IYF3 940 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 MMTAG2Q9BU76 263 aaKnown RBP18.44■□□□□ 0.54
SIPA1-201ENST00000394224 LRRC4CQ9HCJ2 640 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 PLAGL2Q9UPG8 496 aa18.44■□□□□ 0.54
SIPA1-201ENST00000394224 USP8P40818 1118 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 CACNB3P54284 484 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 PABPC4Q13310 644 aaKnown RBP eCLIP18.43■□□□□ 0.545e-6■■■□□ 18.2
SIPA1-201ENST00000394224 MXD3Q9BW11 206 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 COL1A1P02452 1464 aaPredicted RBP18.43■□□□□ 0.54
SIPA1-201ENST00000394224 POTEB3A0JP26 581 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 POTECB2RU33 542 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 TRAPPC10P48553 1259 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 SF3B2Q13435 895 aaKnown RBP18.43■□□□□ 0.54
SIPA1-201ENST00000394224 POTEBQ6S5H4 581 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 IFT20Q8IY31 132 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 CCDC170Q8IYT3 715 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 CCDC114Q96M63 670 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 PHF20L1A8MW92 1017 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 CHMP2AO43633 222 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 LSP1P33241 339 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 GRB10Q13322 594 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 USH1GQ495M9 461 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 TSG101Q99816 390 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 SELENOSQ9BQE4 189 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 TTYH3Q9C0H2 523 aa18.43■□□□□ 0.54
SIPA1-201ENST00000394224 DNAJC17Q9NVM6 304 aaKnown RBP18.43■□□□□ 0.54
SIPA1-201ENST00000394224 NOVA2Q9UNW9 492 aaKnown RBP18.43■□□□□ 0.54
SIPA1-201ENST00000394224 PPP2R5BQ15173 497 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 CCDC25Q86WR0 208 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 MGARPQ8TDB4 240 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 ATP8A1Q9Y2Q0 1164 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 KCPQ6ZWJ8 1503 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 FER1L4A9Z1Z3 1794 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 ERVV-1B6SEH8 477 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 GNPATO15228 680 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 TCP1P17987 556 aaKnown RBP18.42■□□□□ 0.54
SIPA1-201ENST00000394224 EP400NLQ6ZTU2 488 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 PANK4Q9NVE7 773 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 ZNF804BA4D1E1 1349 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 DAPK3O43293 454 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 SCNN1DP51172 638 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 TCP10Q12799 353 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 MEA1Q16626 185 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 TMEM266Q2M3C6 531 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 SHROOM1Q2M3G4 852 aaPredicted RBP18.42■□□□□ 0.54
SIPA1-201ENST00000394224 SH2D3AQ9BRG2 576 aa18.42■□□□□ 0.54
SIPA1-201ENST00000394224 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
SIPA1-201ENST00000394224 ATRNO75882 1429 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 C6orf229H3BNL8 230 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 AARSP49588 968 aaKnown RBP eCLIP18.41■□□□□ 0.54
SIPA1-201ENST00000394224 UBXN2AP68543 259 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 ADAM9Q13443 819 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 MAN2A1Q16706 1144 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 RETREG2Q8NC44 543 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 EFCC1Q9HA90 598 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 PKD2L1Q9P0L9 805 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 ARPP21Q9UBL0 812 aaPredicted RBP18.41■□□□□ 0.54
SIPA1-201ENST00000394224 BTDP43251 543 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 TRIM51Q9BSJ1 452 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 TSGA10Q9BZW7 698 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 ANAPC4Q9UJX5 808 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 RTCBQ9Y3I0 505 aaKnown RBP18.41■□□□□ 0.54
SIPA1-201ENST00000394224 POTEFA5A3E0 1075 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 TLR2O60603 784 aa18.41■□□□□ 0.54
SIPA1-201ENST00000394224 TUBBP07437 444 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms