RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 STEAP3Q658P3 488 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 USP53Q70EK8 1073 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 FERMT3Q86UX7 667 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 OSBP2Q969R2 916 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 BDH2Q9BUT1 245 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 PHF20Q9BVI0 1012 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 USP40Q9NVE5 1235 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 PCDHB4Q9Y5E5 795 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 TCRBV5S2A0A599 114 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 BLACEA4D250 179 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 HGSO14964 777 aaPredicted RBP5.43□□□□□ -1.54
TRAV40-201ENST00000390467 PRODHO43272 600 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 TADA3O75528 432 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 CELA3BP08861 270 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 RPL13P26373 211 aaKnown RBP5.43□□□□□ -1.54
TRAV40-201ENST00000390467 GJA9P57773 515 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 PRR31Q5SQ13 230 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 KCNT2Q6UVM3 1135 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 ZC3H18Q86VM9 953 aaKnown RBP5.43□□□□□ -1.54
TRAV40-201ENST00000390467 KYQ8NBH2 561 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 ADAMTS17Q8TE56 1095 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 DDX1Q92499 740 aaKnown RBP5.43□□□□□ -1.54
TRAV40-201ENST00000390467 ZSWIM3Q96MP5 696 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 AARSD1Q9BTE6 412 aaKnown RBP5.43□□□□□ -1.54
TRAV40-201ENST00000390467 LNPKQ9C0E8 428 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 EPB41L1Q9H4G0 881 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 GPR27Q9NS67 375 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 WASF3Q9UPY6 502 aa5.43□□□□□ -1.54
TRAV40-201ENST00000390467 SMARCA5O60264 1052 aaPredicted RBP5.42□□□□□ -1.54
TRAV40-201ENST00000390467 FGFR1P11362 822 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 CNR2P34972 360 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 HSP90AA2PQ14568 343 aaPredicted RBP5.42□□□□□ -1.54
TRAV40-201ENST00000390467 NAALADL2Q58DX5 795 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 ZFYVE27Q5T4F4 411 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 TTLL7Q6ZT98 887 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 PIP4K2CQ8TBX8 421 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 SGSM3Q96HU1 749 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 YIPF4Q9BSR8 244 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 JAM3Q9BX67 310 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 DTLQ9NZJ0 730 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 MYOTQ9UBF9 498 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 RBPJLQ9UBG7 517 aa5.42□□□□□ -1.54
TRAV40-201ENST00000390467 E9PSI1 815 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 DGKIO75912 1065 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 PABPC1P11940 636 aaKnown RBP5.41□□□□□ -1.54
TRAV40-201ENST00000390467 ZC3H6P61129 1189 aaKnown RBP5.41□□□□□ -1.54
TRAV40-201ENST00000390467 NFKB2Q00653 900 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 CHRNA2Q15822 529 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 UBXN11Q5T124 520 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 TEPPQ6URK8 271 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 SPATC1Q76KD6 591 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 ST13P5Q8NFI4 369 aaPredicted RBP5.41□□□□□ -1.54
TRAV40-201ENST00000390467 PCDH18Q9HCL0 1135 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 MSRB2Q9Y3D2 182 aa5.41□□□□□ -1.54
TRAV40-201ENST00000390467 LRG1P02750 347 aa5.4□□□□□ -1.54
TRAV40-201ENST00000390467 NKX3-2P78367 333 aa5.4□□□□□ -1.54
TRAV40-201ENST00000390467 PRRT2Q7Z6L0 340 aaPredicted RBP5.4□□□□□ -1.54
TRAV40-201ENST00000390467 RBM12BQ8IXT5 1001 aaKnown RBP5.4□□□□□ -1.54
TRAV40-201ENST00000390467 TTLL6Q8N841 843 aa5.4□□□□□ -1.54
TRAV40-201ENST00000390467 TOE1Q96GM8 510 aaKnown RBP5.4□□□□□ -1.54
TRAV40-201ENST00000390467 TRIM55Q9BYV6 548 aa5.4□□□□□ -1.54
TRAV40-201ENST00000390467 PODXL2Q9NZ53 605 aa5.4□□□□□ -1.54
TRAV40-201ENST00000390467 ASH2LQ9UBL3 628 aa5.4□□□□□ -1.54
TRAV40-201ENST00000390467 ASXL2Q76L83 1435 aa5.4□□□□□ -1.55
TRAV40-201ENST00000390467 DDX3XO00571 662 aaKnown RBP eCLIP5.39□□□□□ -1.55
TRAV40-201ENST00000390467 SLC27A2O14975 620 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 ADCY3O60266 1144 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 STK10O94804 968 aaKnown RBP5.39□□□□□ -1.55
TRAV40-201ENST00000390467 ZNF28P17035 718 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 GRK2P25098 689 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 GRK3P35626 688 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 EFEMP1Q12805 493 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 RGL3Q3MIN7 710 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 MCTP2Q6DN12 878 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 RSPO2Q6UXX9 243 aaPredicted RBP5.39□□□□□ -1.55
TRAV40-201ENST00000390467 TMC5Q6UXY8 1006 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 NSMFQ6X4W1 530 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 LBX2Q6XYB7 198 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 PROSER1Q86XN7 944 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 DCAF4Q8WV16 495 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 SMOC1Q9H4F8 434 aa5.39□□□□□ -1.55
TRAV40-201ENST00000390467 TRAV20A0A0B4J274 112 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 IQCA1LA6NCM1 817 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 LTFP02788 710 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 COL6A2P12110 1019 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 PLP2Q04941 152 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 GRIN1Q05586 938 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 FAM26FQ5R3K3 315 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 STYK1Q6J9G0 422 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 CKAP2LQ8IYA6 745 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 TXNDC5Q8NBS9 432 aaKnown RBP5.38□□□□□ -1.55
TRAV40-201ENST00000390467 PHOSPHO1Q8TCT1 267 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 ZCCHC14Q8WYQ9 949 aaKnown RBP5.38□□□□□ -1.55
TRAV40-201ENST00000390467 SLC6A20Q9NP91 592 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 NGRNQ9NPE2 291 aaKnown RBP5.38□□□□□ -1.55
TRAV40-201ENST00000390467 TELO2Q9Y4R8 837 aa5.38□□□□□ -1.55
TRAV40-201ENST00000390467 CCDC85CA6NKD9 419 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 NKRFO15226 690 aaKnown RBP eCLIP5.37□□□□□ -1.55
TRAV40-201ENST00000390467 DIAPH1O60610 1272 aaKnown RBP5.37□□□□□ -1.55
TRAV40-201ENST00000390467 MLLT6P55198 1093 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms