RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 DDX42Q86XP3 938 aaKnown RBP eCLIP18■□□□□ 0.47
TNIP1-202ENST00000389378 OTUD6BQ8N6M0 293 aa18■□□□□ 0.47
TNIP1-202ENST00000389378 ZMYND12Q9H0C1 365 aa18■□□□□ 0.47
TNIP1-202ENST00000389378 C6orf50Q9HD87 102 aa18■□□□□ 0.47
TNIP1-202ENST00000389378 A0A1B0GUL6 1792 aa18■□□□□ 0.47
TNIP1-202ENST00000389378 PALM3A6NDB9 673 aaPredicted RBP18■□□□□ 0.47
TNIP1-202ENST00000389378 LSP1P33241 339 aa18■□□□□ 0.47
TNIP1-202ENST00000389378 SNX29Q8TEQ0 813 aa18■□□□□ 0.47
TNIP1-202ENST00000389378 PPANQ9NQ55 473 aaKnown RBP18■□□□□ 0.47
TNIP1-202ENST00000389378 NHSL1Q5SYE7 1610 aa18■□□□□ 0.47
TNIP1-202ENST00000389378 KIAA0754O94854 1291 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
TNIP1-202ENST00000389378 KIAA0753Q2KHM9 967 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 ASTE1Q2TB18 679 aaPredicted RBP17.99■□□□□ 0.47
TNIP1-202ENST00000389378 CEP85LQ5SZL2 805 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 FAM83BQ5T0W9 1011 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 LRRC55Q6ZSA7 311 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 UNC13DQ70J99 1090 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 FAM133AQ8N9E0 248 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 DAGLBQ8NCG7 672 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 A0A087X0T9 212 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 FAM228BP0C875 321 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 IQCKQ8N0W5 287 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 PIK3R5Q8WYR1 880 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 CAVIN3Q969G5 261 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 ZHX3Q9H4I2 956 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 BCCIPQ9P287 314 aaKnown RBP eCLIP17.99■□□□□ 0.47
TNIP1-202ENST00000389378 KCNQ2O43526 872 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 NR1D1P20393 614 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 ITIH3Q06033 890 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 ECM1Q16610 540 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 SLC9C1Q4G0N8 1177 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 SFMBT2Q5VUG0 894 aa17.99■□□□□ 0.47
TNIP1-202ENST00000389378 ZNF572Q7Z3I7 529 aaPredicted RBP17.99■□□□□ 0.47
TNIP1-202ENST00000389378 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
TNIP1-202ENST00000389378 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
TNIP1-202ENST00000389378 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
TNIP1-202ENST00000389378 RAD51CO43502 376 aa17.98■□□□□ 0.47
TNIP1-202ENST00000389378 LCA5LO95447 670 aa17.98■□□□□ 0.47
TNIP1-202ENST00000389378 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
TNIP1-202ENST00000389378 MAGEF1Q9HAY2 307 aa17.98■□□□□ 0.47
TNIP1-202ENST00000389378 NOL4O94818 638 aa17.98■□□□□ 0.47
TNIP1-202ENST00000389378 SF3A3Q12874 501 aaKnown RBP eCLIP17.98■□□□□ 0.474e-7■■■■■ 35.8
TNIP1-202ENST00000389378 PAK2Q13177 524 aa17.98■□□□□ 0.47
TNIP1-202ENST00000389378 AP1M1Q9BXS5 423 aa17.98■□□□□ 0.47
TNIP1-202ENST00000389378 PLAAQ9Y263 795 aa17.98■□□□□ 0.47
TNIP1-202ENST00000389378 GOLGB1Q14789 3259 aaKnown RBP17.98■□□□□ 0.47
TNIP1-202ENST00000389378 NPHP3-ACAD11A0A0J9YXS1 232 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 KCNK3O14649 394 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 EPB41P11171 864 aaKnown RBP17.97■□□□□ 0.47
TNIP1-202ENST00000389378 RASA1P20936 1047 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 GNA11P29992 359 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 TNNI2P48788 182 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 SKOR1P84550 965 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 HDLBPQ00341 1268 aaKnown RBP17.97■□□□□ 0.47
TNIP1-202ENST00000389378 NAA35Q5VZE5 725 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 MCTP2Q6DN12 878 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 GALNT17Q6IS24 598 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 ZNF652Q9Y2D9 606 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 USP17L5A8MUK1 530 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 E7EVH7 732 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 PJA2O43164 708 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 MARCH6O60337 910 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 LDHBP07195 334 aaKnown RBP17.97■□□□□ 0.47
TNIP1-202ENST00000389378 IFT88Q13099 833 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
TNIP1-202ENST00000389378 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 CLEC10AQ8IUN9 316 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 GUF1Q8N442 669 aaKnown RBP17.97■□□□□ 0.47
TNIP1-202ENST00000389378 EYA3Q99504 573 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 GDF3Q9NR23 364 aa17.97■□□□□ 0.47
TNIP1-202ENST00000389378 MYH14Q7Z406 1995 aaKnown RBP17.96■□□□□ 0.47
TNIP1-202ENST00000389378 ACTN1P12814 892 aa17.96■□□□□ 0.47
TNIP1-202ENST00000389378 UBE2SQ16763 222 aa17.96■□□□□ 0.47
TNIP1-202ENST00000389378 TSG101Q99816 390 aa17.96■□□□□ 0.47
TNIP1-202ENST00000389378 KLHL30Q0D2K2 578 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 MYOCDQ8IZQ8 938 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 ANKIB1Q9P2G1 1089 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 DLEC1Q9Y238 1755 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 FGFR1OPO95684 399 aaKnown RBP17.95■□□□□ 0.46
TNIP1-202ENST00000389378 KRT79Q5XKE5 535 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 ZNF473Q8WTR7 871 aaKnown RBP17.95■□□□□ 0.46
TNIP1-202ENST00000389378 RAD54LQ92698 747 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 CEP95Q96GE4 821 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 CCT8L2Q96SF2 557 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 SRP68Q9UHB9 627 aaKnown RBP17.95■□□□□ 0.46
TNIP1-202ENST00000389378 COL4A3BPQ9Y5P4 624 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 MYH1P12882 1939 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 MEFVO15553 781 aaPredicted RBP17.95■□□□□ 0.46
TNIP1-202ENST00000389378 CEP104O60308 925 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 ATP2C2O75185 946 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 PPP1R2P41236 205 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 B4GALNT4Q76KP1 1039 aa17.95■□□□□ 0.46
TNIP1-202ENST00000389378 PPP1R37O75864 691 aa17.94■□□□□ 0.46
TNIP1-202ENST00000389378 TMOD1P28289 359 aa17.94■□□□□ 0.46
TNIP1-202ENST00000389378 COASYQ13057 564 aa17.94■□□□□ 0.46
TNIP1-202ENST00000389378 NAB2Q15742 525 aa17.94■□□□□ 0.46
TNIP1-202ENST00000389378 TMEM266Q2M3C6 531 aa17.94■□□□□ 0.46
TNIP1-202ENST00000389378 EPN3Q9H201 632 aa17.94■□□□□ 0.46
TNIP1-202ENST00000389378 GPCPD1Q9NPB8 672 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms