RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 KIF17Q9P2E2 1029 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 ASMTLO95671 621 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 NUMBP49757 651 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 TJAP1Q5JTD0 557 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 RNF168Q8IYW5 571 aaPredicted RBP13.45□□□□□ -0.26
CHD3-203ENST00000380358 MAGOHBQ96A72 148 aaKnown RBP13.45□□□□□ -0.26
CHD3-203ENST00000380358 EYA1Q99502 592 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 GLT8D2Q9H1C3 349 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 CCDC195A0A1B0GUA6 201 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 CAPN15O75808 1086 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 C10orf76Q5T2E6 689 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 YAF2Q8IY57 180 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 PLBD2Q8NHP8 589 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 SLC10A4Q96EP9 437 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 SUCLG2Q96I99 432 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHD3-203ENST00000380358 IFT43Q96FT9 208 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 PRR23AA6NEV1 266 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 GOLGA8MH3BSY2 632 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
CHD3-203ENST00000380358 CATSPER3Q86XQ3 398 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 SMYD3Q9H7B4 428 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 CDK13Q14004 1512 aaKnown RBP13.44□□□□□ -0.26
CHD3-203ENST00000380358 DENND3A2RUS2 1198 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 MCF2LO15068 1137 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 RBBP7Q16576 425 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 C11orf96Q7Z7L8 435 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 C1orf131Q8NDD1 294 aaKnown RBP13.44□□□□□ -0.26
CHD3-203ENST00000380358 FAN1Q9Y2M0 1017 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 H0YC42 278 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 DNAJC6O75061 913 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 ARL4DP49703 201 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
CHD3-203ENST00000380358 SNX2O60749 519 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 MSH2P43246 934 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 ANGPT1Q15389 498 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
CHD3-203ENST00000380358 TMTC1Q8IUR5 882 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 NDFIP2Q9NV92 336 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 SFI1A8K8P3 1242 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 CCNA1P78396 465 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 PASD1Q8IV76 773 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 MAP7D3Q8IWC1 876 aa13.44□□□□□ -0.26
CHD3-203ENST00000380358 XPOTO43592 962 aaKnown RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 BLIDQ8IZY5 108 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 MYO1FO00160 1098 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 PIK3R2O00459 728 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 BRD1O95696 1058 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 MOCS2O96007 188 aaPredicted RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 ADCK2Q7Z695 626 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 SLC26A7Q8TE54 656 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 C6orf203Q9P0P8 240 aaPredicted RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 MRPS25P82663 173 aaKnown RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 AGR3Q8TD06 166 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 ERO1AQ96HE7 468 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 ATP8A2Q9NTI2 1148 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 SNX14Q9Y5W7 946 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 SMC5Q8IY18 1101 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 METTL22Q9BUU2 404 aaPredicted RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 UBE2TQ9NPD8 197 aaPredicted RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 PALD1Q9ULE6 856 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 SYCE1LA8MT33 242 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 DNAJC8O75937 253 aaPredicted RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 PLS3P13797 630 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 HOXA13P31271 388 aaPredicted RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 PSMC5P62195 406 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 POU5F1BQ06416 359 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 MFSD4BQ5TF39 518 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 ZSCAN10Q96SZ4 725 aaPredicted RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 TRIM55Q9BYV6 548 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 GTSE1Q9NYZ3 720 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
CHD3-203ENST00000380358 TTLL7Q6ZT98 887 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 PNMA1Q8ND90 353 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 SLC7A3Q8WY07 619 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 GINM1Q9NU53 330 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 ATP8A1Q9Y2Q0 1164 aa13.43□□□□□ -0.26
CHD3-203ENST00000380358 DIAPH2O60879 1101 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 ARHGAP25P42331 645 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 PLEKHM2Q8IWE5 1019 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 EFCAB13Q8IY85 973 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 XPO4Q9C0E2 1151 aaKnown RBP13.42□□□□□ -0.26
CHD3-203ENST00000380358 LONP1P36776 959 aaKnown RBP13.42□□□□□ -0.26
CHD3-203ENST00000380358 ZBTB17Q13105 803 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 SGO2Q562F6 1265 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 QTRT2Q9H974 415 aaKnown RBP13.42□□□□□ -0.26
CHD3-203ENST00000380358 TYW1Q9NV66 732 aaKnown RBP13.42□□□□□ -0.26
CHD3-203ENST00000380358 SENP1Q9P0U3 644 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 ATP8B3O60423 1300 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 GFPT2O94808 682 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 ATG16L1Q676U5 607 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms