RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 VIPAS39Q9H9C1 493 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
BEST1-201ENST00000378043 PCDHA2Q9Y5H9 948 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 ZBTB5O15062 677 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 NOL4O94818 638 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 FGFR1OPO95684 399 aaKnown RBP12.11□□□□□ -0.47
BEST1-201ENST00000378043 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
BEST1-201ENST00000378043 ZSCAN26Q16670 478 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 HYIQ5T013 277 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 CCNI2Q6ZMN8 369 aaPredicted RBP12.11□□□□□ -0.47
BEST1-201ENST00000378043 FAM71BQ8TC56 605 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 CUL5Q93034 780 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 DRC1Q96MC2 740 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 HINFPQ9BQA5 517 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 HPCAL4Q9UM19 191 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 PCDHA12Q9UN75 941 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 E9PMD0 336 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 AKR1B10O60218 316 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 TLR2O60603 784 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 USO1O60763 962 aaKnown RBP12.11□□□□□ -0.47
BEST1-201ENST00000378043 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
BEST1-201ENST00000378043 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
BEST1-201ENST00000378043 PDXDC1Q6P996 788 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 ZNF572Q7Z3I7 529 aaPredicted RBP12.11□□□□□ -0.47
BEST1-201ENST00000378043 PROM2Q8N271 834 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 CAGE1Q8TC20 777 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 PSTPIP2Q9H939 334 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 ANKRD31Q8N7Z5 1873 aa12.11□□□□□ -0.47
BEST1-201ENST00000378043 USP17L15C9J2P7 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L13C9JLJ4 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L11C9JVI0 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L18D6R9N7 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L22D6RA61 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L17D6RBQ6 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L19D6RCP7 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L20D6RJB6 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 PJA2O43164 708 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 TACC1O75410 805 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 PRPF6O94906 941 aaKnown RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 PRLRP16471 622 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SCNN1DP51172 638 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 FKBP3Q00688 224 aaKnown RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L24Q0WX57 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SHROOM1Q2M3G4 852 aaPredicted RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 FAM26FQ5R3K3 315 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 USP17L6PQ6QN14 398 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 LRRC27Q9C0I9 530 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 DEF6Q9H4E7 631 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 MED4Q9NPJ6 270 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 PANK4Q9NVE7 773 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 TBC1D7Q9P0N9 293 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SWAP70Q9UH65 585 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 COL4A3BPQ9Y5P4 624 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 MYO3BQ8WXR4 1341 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SIPA1L1O43166 1804 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 NPHP3-ACAD11A0A0J9YXS1 232 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 TRAF5O00463 557 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 MCM3P25205 808 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 APBA1Q02410 837 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 NFIAQ12857 509 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 GPATCH4Q5T3I0 446 aaKnown RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 CDC42EP5Q6NZY7 148 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SP8Q8IXZ3 490 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 DNAJC18Q9H819 358 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 KANSL2Q9H9L4 492 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 KIAA1024Q9UPX6 916 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SUGT1Q9Y2Z0 365 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 TULP2O00295 520 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 CXCR5P32302 372 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SLC1A4P43007 532 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 MAGEA1P43355 309 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 MAPK8IP2Q13387 824 aaPredicted RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 SEPT2Q15019 361 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 HSP90B2PQ58FF3 399 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 APOBEC3HQ6NTF7 200 aaKnown RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 MMGT1Q8N4V1 131 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 SPATA4Q8NEY3 305 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 RIN2Q8WYP3 895 aaPredicted RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 PSMB7Q99436 277 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 P2RX7Q99572 595 aaKnown RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 TSG101Q99816 390 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 LRRC1Q9BTT6 524 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 EDEM3Q9BZQ6 932 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 NLRC4Q9NPP4 1024 aa12.1□□□□□ -0.47
BEST1-201ENST00000378043 EHD2Q9NZN4 543 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms