RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MECOMQ03112 1051 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 GRM4Q14833 912 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 PLCB4Q15147 1175 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 QPCTQ16769 361 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 USP38Q8NB14 1042 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 CRNKL1Q9BZJ0 848 aaKnown RBP18.18■□□□□ 0.5
TRIM39-201ENST00000376656 CPVLQ9H3G5 476 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 TAF1DQ9H5J8 278 aaPredicted RBP18.18■□□□□ 0.5
TRIM39-201ENST00000376656 PLCB1Q9NQ66 1216 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 BLOC1S4Q9NUP1 217 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 DDX20Q9UHI6 824 aaKnown RBP18.18■□□□□ 0.5
TRIM39-201ENST00000376656 GOLGA6L10A6NI86 522 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 MYBP10242 640 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 ECHS1P30084 290 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 UAP1Q16222 522 aaPredicted RBP18.18■□□□□ 0.5
TRIM39-201ENST00000376656 SV2BQ7L1I2 683 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 TBC1D5Q92609 795 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 BACH1O14867 736 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 NOL4O94818 638 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 IBSPP21815 317 aaPredicted RBP18.17■□□□□ 0.5
TRIM39-201ENST00000376656 TMOD1P28289 359 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 PSEN1P49768 467 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 MMP14P50281 582 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 GRB10Q13322 594 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 SFMBT2Q5VUG0 894 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 CCDC121Q6ZUS5 278 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 DDX42Q86XP3 938 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRIM39-201ENST00000376656 CCDC114Q96M63 670 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 PCDHGC5Q9Y5F6 944 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 LAMB1P07942 1786 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 ABCB11O95342 1321 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 H0YGN5 161 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 ENOX2Q16206 610 aaKnown RBP18.17■□□□□ 0.5
TRIM39-201ENST00000376656 UNC13DQ70J99 1090 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 GUF1Q8N442 669 aaKnown RBP18.17■□□□□ 0.5
TRIM39-201ENST00000376656 CALML4Q96GE6 196 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 OSBPL7Q9BZF2 842 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 NFS1Q9Y697 457 aa18.17■□□□□ 0.5
TRIM39-201ENST00000376656 GMNCA6NCL1 334 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 GCOM1H8Y6P7 765 aaPredicted RBP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 SERPING1P05155 500 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 USP17L8P0C7I0 530 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 MYZAPP0CAP1 466 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 CHRM1P11229 460 aaPredicted RBP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 TNNC1P63316 161 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 ARID5AQ03989 594 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 PREPLQ4J6C6 727 aaPredicted RBP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 FAM83BQ5T0W9 1011 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 GALNT17Q6IS24 598 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 SLC12A6Q9UHW9 1150 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 USP17L3A6NCW0 530 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 USP17L4A6NCW7 530 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 SRRM3A6NNA2 597 aaPredicted RBP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 DNM1LO00429 736 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 FGFR1OPO95684 399 aaKnown RBP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 GOLGA8HP0CJ92 632 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 USP17L1Q7RTZ2 530 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 ARFGAP2Q8N6H7 521 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 FAM84BQ96KN1 310 aaPredicted RBP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 EDEM3Q9BZQ6 932 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 ISCUQ9H1K1 167 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 MCM8Q9UJA3 840 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 A0A087X0T9 212 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 FAM228BP0C875 321 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 TXKP42681 527 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 POLR2FP61218 127 aaKnown RBP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 ZNF844Q08AG5 666 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 KIAA0753Q2KHM9 967 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 CAVIN4Q5BKX8 364 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 GIMAP7Q8NHV1 300 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 NEUROG2Q9H2A3 272 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 MCM9Q9NXL9 1143 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 DONSONQ9NYP3 566 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 CEP72Q9P209 647 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 BCCIPQ9P287 314 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 ARPP21Q9UBL0 812 aaPredicted RBP18.16■□□□□ 0.5
TRIM39-201ENST00000376656 SUFUQ9UMX1 484 aa18.16■□□□□ 0.5
TRIM39-201ENST00000376656 ADAMTS2O95450 1211 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 PDHBP11177 359 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 LRRC63Q05C16 580 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 NONOQ15233 471 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRIM39-201ENST00000376656 LRIG3Q6UXM1 1119 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 DGKHQ86XP1 1220 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 DYNLL2Q96FJ2 89 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 PNMA5Q96PV4 448 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 LSM14BQ9BX40 385 aaKnown RBP18.15■□□□□ 0.5
TRIM39-201ENST00000376656 ATP8A2Q9NTI2 1148 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 TMEM59LQ9UK28 342 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 ATP6V0A2Q9Y487 856 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 SSBP05455 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRIM39-201ENST00000376656 DRP2Q13474 957 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 NEDD9Q14511 834 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 PTPROQ16827 1216 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 GOLPH3Q9H4A6 298 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 CNOT8Q9UFF9 292 aaKnown RBP18.15■□□□□ 0.5
TRIM39-201ENST00000376656 KCNK3O14649 394 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 TRAPPC3O43617 180 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 CDR1P51861 262 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 NAPAP54920 295 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms