RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 CCDC121Q6ZUS5 278 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 ADAT2Q7Z6V5 191 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 CATIPQ7Z7H3 387 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 DZIP1Q86YF9 867 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 DRAXINQ8NBI3 349 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 CRAMP1Q96RY5 1269 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 SYT15Q9BQS2 421 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 ACTR5Q9H9F9 607 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 SPATS2LQ9NUQ6 558 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 PCMTD2Q9NV79 361 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 CORO1CQ9ULV4 474 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 ANO9A1A5B4 782 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 CYP27B1O15528 508 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 PAEPP09466 180 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 RARAP10276 462 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 VEGFAP15692 232 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 CACNB1Q02641 598 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 NBPF9Q3BBW0 867 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 GLE1Q53GS7 698 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 ANO7Q6IWH7 933 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 DNAAF5Q86Y56 855 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 CNKSR1Q969H4 720 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 UTP4Q969X6 686 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 RPGRIP1Q96KN7 1286 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 NLRC4Q9NPP4 1024 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 FAM207AQ9NSI2 230 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 PPP1R1BQ9UD71 204 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 RAD51CO43502 376 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 RTN3O95197 1032 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 FESP07332 822 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 EZRP15311 586 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 ATP4AP20648 1035 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 MCM3P25205 808 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 STAT6P42226 847 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 ALDH5A1P51649 535 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 RWDD2BP57060 319 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 CWF19L1Q69YN2 538 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 CCDC70Q6NSX1 233 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 TBC1D1Q86TI0 1168 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 NELFBQ8WX92 580 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 SAAL1Q96ER3 474 aa9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 DUSP9Q99956 384 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 BSDC1Q9NW68 430 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-203ENST00000371123 TNS3Q68CZ2 1445 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 HEXIM1O94992 359 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 SLC5A1P13866 664 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 GM2AP17900 193 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 HSPA9P38646 679 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 ASIC1P78348 528 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 RNASELQ05823 741 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 TMEM62Q0P6H9 643 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 ZNF268Q14587 947 aaPredicted RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 UHMK1Q8TAS1 419 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 SPAG5Q96R06 1193 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 GOPCQ9HD26 462 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 ADAMTS7Q9UKP4 1686 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 KRT16P08779 473 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 PHKG2P15735 406 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 CKAP4Q07065 602 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 ATXN2LQ8WWM7 1075 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 BTG4Q9NY30 223 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 PKD2L1Q9P0L9 805 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 ZSWIM5Q9P217 1185 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 PDS5AQ29RF7 1337 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 MYH4Q9Y623 1939 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 RIMBP2O15034 1052 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 PLSCR1O15162 318 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 FNBP4Q8N3X1 1017 aaPredicted RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 C1orf131Q8NDD1 294 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 ATL2Q8NHH9 583 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 RWDD2AQ9UIY3 292 aa9.62□□□□□ -0.87
SMARCA1-203ENST00000371123 BCL9O00512 1426 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 GPR75-ASB3A0A0A6YYF3 556 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 LGALS16A8MUM7 142 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 USP17L21D6R901 530 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 ORC4O43929 436 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 BUB1BO60566 1050 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 CLTAP09496 248 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 NCALDP61601 193 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 PPP1R7Q15435 360 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 ASTE1Q2TB18 679 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 CFAP58Q5T655 872 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 KIF2BQ8N4N8 673 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 PLBD2Q8NHP8 589 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 APPBP2Q92624 585 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 HPS3Q969F9 1004 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 PIH1D3Q9NQM4 214 aaKnown RBP9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 ADAM22Q9P0K1 906 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 ASB3Q9Y575 518 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 CCT8L1PA6NM43 557 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 RNF8O76064 485 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 VAV2P52735 878 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 SOGA3Q5TF21 947 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 PIGWQ7Z7B1 504 aa9.61□□□□□ -0.87
SMARCA1-203ENST00000371123 IFT43Q96FT9 208 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms