RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SYNJ2BP-COX16A0A087WUM0 186 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 POTEB3A0JP26 581 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 POTECB2RU33 542 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 CCT5P48643 541 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 PPP2R5CQ13362 524 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 Q3C1V9 767 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 ZNF658Q5TYW1 1059 aaPredicted RBP9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 POTEBQ6S5H4 581 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 APBB1IPQ7Z5R6 666 aaPredicted RBP9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 CCDC77Q9BR77 488 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 NHEJ1Q9H9Q4 299 aaPredicted RBP9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 COX16Q9P0S2 106 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 STRN3Q13033 797 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 ITPK1Q13572 414 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 IQCB1Q15051 598 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 TRIM58Q8NG06 486 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 STAG1Q8WVM7 1258 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 CABS1Q96KC9 395 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 EMILIN3Q9NT22 766 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 TTC26A0AVF1 554 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 ZNF394Q53GI3 561 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 RASGRP2Q7LDG7 609 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 ANKRD35Q8N283 1001 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 IGDCC4Q8TDY8 1250 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 SMARCAL1Q9NZC9 954 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 AMFRQ9UKV5 643 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 MAGED2Q9UNF1 606 aaPredicted RBP9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 LEMD3Q9Y2U8 911 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 CEP83Q9Y592 693 aa9.98□□□□□ -0.81
SMARCA1-202ENST00000371122 POTEFA5A3E0 1075 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 POTEIP0CG38 1075 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 AKR1B1P15121 316 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 GTF2A1P52655 376 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 FKBP3Q00688 224 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 CDC37Q16543 378 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 TCP11X2Q5H9J9 407 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 SCYL2Q6P3W7 929 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 POTEEQ6S8J3 1075 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 GBP6Q6ZN66 633 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 TXNRD3Q86VQ6 643 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 CHURC1Q8WUH1 139 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 POMGNT1Q8WZA1 660 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 TACO1Q9BSH4 297 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 RASSF4Q9H2L5 321 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 NDST4Q9H3R1 872 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 TMOD4Q9NZQ9 345 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 ZBED4O75132 1171 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 MYCP01106 439 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 PLA2G4BP0C869 781 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 GRAPQ13588 217 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 PRAMEF18Q5VWM3 479 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 ZNF746Q6NUN9 644 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 SLC30A10Q6XR72 485 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 GRAPLQ8TC17 118 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 ZNF577Q9BSK1 485 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 APOL6Q9BWW8 343 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 MROH7-TTC4A0A0A0MT08 1334 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 NPHP3-ACAD11A0A0J9YXS1 232 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 HNRNPDLO14979 420 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 TBC1D8O95759 1140 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 KRT15P19012 456 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 PRPHP41219 470 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 IFRD2Q12894 506 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 PAK2Q13177 524 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 VWA3BQ502W6 1294 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 SH2D4AQ9H788 454 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 LARSQ9P2J5 1176 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 SEMA3EO15041 775 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 HEXIM1O94992 359 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 PNMA6AP0CW24 399 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 BMP3P12645 472 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 CCNE1P24864 410 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 CHRNA5P30532 468 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 KCTD19Q17RG1 926 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 TTC31Q49AM3 519 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 E4F1Q66K89 784 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 SEPT14Q6ZU15 432 aa9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 THOC1Q96FV9 657 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-202ENST00000371122 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 PDE6BP35913 854 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 PLTPP55058 493 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 SMAD1Q15797 465 aaKnown RBP9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 SESTD1Q86VW0 696 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 NCAPG2Q86XI2 1143 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 ARFGAP2Q8N6H7 521 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 ATP8A1Q9Y2Q0 1164 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 COL4A3BPQ9Y5P4 624 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 RGPD3A6NKT7 1758 aaPredicted RBP9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 RGPD4Q7Z3J3 1758 aa9.96□□□□□ -0.81
SMARCA1-202ENST00000371122 PAPPAQ13219 1627 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 MFAP3LO75121 409 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 CSPG5O95196 566 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 BCRP11274 1271 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 MARK3P27448 753 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 INPP5BP32019 993 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 GFPT1Q06210 699 aaPredicted RBP9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 ZKSCAN8Q15776 578 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms