RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 TRAPPC3O43617 180 aa18.05■□□□□ 0.48
CTPS2-201ENST00000359276 C21orf2O43822 256 aa18.05■□□□□ 0.48
CTPS2-201ENST00000359276 ATP6V1G2O95670 118 aa18.05■□□□□ 0.48
CTPS2-201ENST00000359276 KRT18P05783 430 aaKnown RBP18.05■□□□□ 0.48
CTPS2-201ENST00000359276 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
CTPS2-201ENST00000359276 KIF5BP33176 963 aa18.05■□□□□ 0.48
CTPS2-201ENST00000359276 SV2BQ7L1I2 683 aa18.05■□□□□ 0.48
CTPS2-201ENST00000359276 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
CTPS2-201ENST00000359276 CPVLQ9H3G5 476 aa18.05■□□□□ 0.48
CTPS2-201ENST00000359276 CPSF2Q9P2I0 782 aaKnown RBP18.05■□□□□ 0.48
CTPS2-201ENST00000359276 CNOT8Q9UFF9 292 aaKnown RBP18.05■□□□□ 0.48
CTPS2-201ENST00000359276 ZNF844Q08AG5 666 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 PPP2R5BQ15173 497 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 MAN2A1Q16706 1144 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 CAPRIN2Q6IMN6 1127 aaKnown RBP18.04■□□□□ 0.48
CTPS2-201ENST00000359276 INTS9Q9NV88 658 aaKnown RBP18.04■□□□□ 0.48
CTPS2-201ENST00000359276 RHOBTB3O94955 611 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 STAG2Q8N3U4 1231 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 SAAL1Q96ER3 474 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 PSMD1Q99460 953 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 GOLGA8HP0CJ92 632 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 KCNK9Q9NPC2 374 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 RNF14Q9UBS8 474 aa18.04■□□□□ 0.48
CTPS2-201ENST00000359276 TCRBV5S4A2TA0A5A2 114 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 ARID4AP29374 1257 aaPredicted RBP18.03■□□□□ 0.48
CTPS2-201ENST00000359276 FLT3P36888 993 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 ADCY1Q08828 1119 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 KCNB1Q14721 858 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 CCDC38Q502W7 563 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 FAM228AQ86W67 206 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 CCDC26Q8TAB7 109 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 PIK3R5Q8WYR1 880 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 TRIM9Q9C026 710 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 RGS16O15492 202 aaPredicted RBP18.03■□□□□ 0.48
CTPS2-201ENST00000359276 PLTPP55058 493 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 ELF3P78545 371 aaPredicted RBP18.03■□□□□ 0.48
CTPS2-201ENST00000359276 LRRC14Q15048 493 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 NBPF9Q3BBW0 867 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 NAALADL2Q58DX5 795 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 KLHL29Q96CT2 875 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 PURBQ96QR8 312 aaKnown RBP18.03■□□□□ 0.48
CTPS2-201ENST00000359276 ATP6V0A4Q9HBG4 840 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 PIK3C2AO00443 1686 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 NRXN3Q9Y4C0 1643 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 CCDC189A1A4V9 331 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 CCT8L1PA6NM43 557 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 TTI1O43156 1089 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 TRAPPC10P48553 1259 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 NAPAP54920 295 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 ITIH3Q06033 890 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 BIRC3Q13489 604 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 LLGL1Q15334 1064 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 MIIPQ5JXC2 388 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 ERGIC2Q96RQ1 377 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 FBXO3Q9UK99 471 aa18.03■□□□□ 0.48
CTPS2-201ENST00000359276 COPB2P35606 906 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 MTMR3Q13615 1198 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 ASIC2Q16515 512 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 GNPTABQ3T906 1256 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 FAM83BQ5T0W9 1011 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 ANKRD42Q8N9B4 389 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 TTYH3Q9C0H2 523 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 KDM6AO15550 1401 aaPredicted RBP18.02■□□□□ 0.48
CTPS2-201ENST00000359276 ABCC12Q96J65 1359 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 CHN1P15882 459 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 ARL6IP4Q66PJ3 421 aaKnown RBP18.02■□□□□ 0.48
CTPS2-201ENST00000359276 USP38Q8NB14 1042 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 FAXDC2Q96IV6 333 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 UBA5Q9GZZ9 404 aa18.02■□□□□ 0.48
CTPS2-201ENST00000359276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.02■□□□□ 0.48
CTPS2-201ENST00000359276 A0A087X0T9 212 aa18.02■□□□□ 0.47
CTPS2-201ENST00000359276 MPHOSPH10O00566 681 aaKnown RBP18.02■□□□□ 0.47
CTPS2-201ENST00000359276 FAM228BP0C875 321 aa18.02■□□□□ 0.47
CTPS2-201ENST00000359276 OTUD6AQ7L8S5 288 aa18.02■□□□□ 0.47
CTPS2-201ENST00000359276 RUBCNQ92622 972 aa18.02■□□□□ 0.47
CTPS2-201ENST00000359276 PRCCQ92733 491 aaPredicted RBP18.02■□□□□ 0.47
CTPS2-201ENST00000359276 PAIP2Q9BPZ3 127 aaKnown RBP18.02■□□□□ 0.47
CTPS2-201ENST00000359276 DIP2AQ14689 1571 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 FAM205AQ6ZU69 1335 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 PCK1P35558 622 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 CACNB1Q02641 598 aaPredicted RBP18.01■□□□□ 0.47
CTPS2-201ENST00000359276 TROAPQ12815 778 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 RNF10Q8N5U6 811 aaKnown RBP18.01■□□□□ 0.47
CTPS2-201ENST00000359276 ZCRB1Q8TBF4 217 aaKnown RBP18.01■□□□□ 0.47
CTPS2-201ENST00000359276 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 XPO6Q96QU8 1125 aaKnown RBP18.01■□□□□ 0.47
CTPS2-201ENST00000359276 TRIM51Q9BSJ1 452 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 MKNK2Q9HBH9 465 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 STARD3NLO95772 234 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 ITGA4P13612 1032 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 IGHMBP2P38935 993 aaKnown RBP18.01■□□□□ 0.47
CTPS2-201ENST00000359276 WLSQ5T9L3 541 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 PDXDC1Q6P996 788 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 SEMA6BQ9H3T3 888 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 PLCB1Q9NQ66 1216 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 NOP53Q9NZM5 478 aaKnown RBP18.01■□□□□ 0.47
CTPS2-201ENST00000359276 MRC1P22897 1456 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 MYH13Q9UKX3 1938 aa18.01■□□□□ 0.47
CTPS2-201ENST00000359276 SPDYE3A6NKU9 549 aa18■□□□□ 0.47
CTPS2-201ENST00000359276 PGRMC1O00264 195 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms