RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 BTG4Q9NY30 223 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 DDX56Q9NY93 547 aaKnown RBP2.77□□□□□ -1.97
CCDC30-201ENST00000340612 PRR13Q9NZ81 148 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 PIM2Q9P1W9 311 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 MAGEC2Q9UBF1 373 aaPredicted RBP2.77□□□□□ -1.97
CCDC30-201ENST00000340612 G3BP2Q9UN86 482 aaKnown RBP2.77□□□□□ -1.97
CCDC30-201ENST00000340612 ATP8A1Q9Y2Q0 1164 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 COQ6Q9Y2Z9 468 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 DNAJC25-GNG10A0A024R161 153 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 SSU72P8A0A1W2PR75 194 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 TMEM82A0PJX8 343 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 CYP26A1O43174 497 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 CPP00450 1065 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 RPL10P27635 214 aaKnown RBP2.77□□□□□ -1.97
CCDC30-201ENST00000340612 ID4P47928 161 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 EGR3Q06889 387 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 LONRF3Q496Y0 759 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 PIK3R6Q5UE93 754 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 STYK1Q6J9G0 422 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 KSR1Q8IVT5 923 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 RCBTB1Q8NDN9 531 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 MAGEB10Q96LZ2 347 aaPredicted RBP2.77□□□□□ -1.97
CCDC30-201ENST00000340612 FEZ2Q9UHY8 353 aaPredicted RBP2.77□□□□□ -1.97
CCDC30-201ENST00000340612 PNMA2Q9UL42 364 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 PCDHA2Q9Y5H9 948 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 CACNA1AO00555 2505 aa2.77□□□□□ -1.97
CCDC30-201ENST00000340612 MED14O60244 1454 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 ZNF891A8MT65 544 aaPredicted RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 KCNQ2O43526 872 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 FARP2O94887 1054 aaPredicted RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 ZNF205O95201 554 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 ESR1P03372 595 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 PAX3P23760 479 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 SOX5P35711 763 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 TDO2P48775 406 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 PCBP3P57721 371 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 BNIP3Q12983 259 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 PKN1Q16512 942 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 GAB4Q2WGN9 574 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 PLEKHG6Q3KR16 790 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 ZKSCAN2Q63HK3 967 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 WAPLQ7Z5K2 1190 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 NXPE1Q8N323 547 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 AFAP1L2Q8N4X5 818 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 DCAF4Q8WV16 495 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 DDX1Q92499 740 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 BRINP2Q9C0B6 783 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 TRIT1Q9H3H1 467 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 NPHP3-ACAD11A0A0J9YXS1 232 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 COQ9O75208 318 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 GLRX3O76003 335 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 MAP4K4O95819 1239 aaPredicted RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 KCNA6P17658 529 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 CALRP27797 417 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 IGFALSP35858 605 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 NOP2P46087 812 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 TEKQ02763 1124 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 CFAP100Q494V2 611 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 CDCA2Q69YH5 1023 aaPredicted RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 MAMDC2Q7Z304 686 aaPredicted RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 MTERF4Q7Z6M4 381 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 RAVER1Q8IY67 606 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 NAT16Q8N8M0 369 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 IGSF22Q8N9C0 903 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 LINC00116Q8NCU8 138 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 TMEM52Q8NDY8 209 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 ENOX1Q8TC92 643 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 NETO1Q8TDF5 533 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 DIO2Q92813 273 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 CHAMP1Q96JM3 812 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 CCDC140Q96MF4 163 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 MYCBPQ99417 103 aaPredicted RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 RBM28Q9NW13 759 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 FRMD4BQ9Y2L6 1034 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 PKD1L2Q7Z442 2459 aa2.76□□□□□ -1.97
CCDC30-201ENST00000340612 BAZ1BQ9UIG0 1483 aaKnown RBP2.76□□□□□ -1.97
CCDC30-201ENST00000340612 M0R2C6 588 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 MPHOSPH10O00566 681 aaKnown RBP2.75□□□□□ -1.97
CCDC30-201ENST00000340612 KCNK3O14649 394 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 FGF10O15520 208 aaPredicted RBP2.75□□□□□ -1.97
CCDC30-201ENST00000340612 EFCAB14O75071 495 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 KATNA1O75449 491 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 ASLP04424 464 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 CFPP27918 469 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 LTBRP36941 435 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 CEBPAP49715 358 aaPredicted RBP2.75□□□□□ -1.97
CCDC30-201ENST00000340612 DNM2P50570 870 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 RIPK4P57078 832 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 ZRSR2Q15696 482 aaKnown RBP2.75□□□□□ -1.97
CCDC30-201ENST00000340612 ZFYVE27Q5T4F4 411 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 TNS2Q63HR2 1409 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 ZNF574Q6ZN55 896 aaPredicted RBP2.75□□□□□ -1.97
CCDC30-201ENST00000340612 FERMT3Q86UX7 667 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 CISD2Q8N5K1 135 aaKnown RBP2.75□□□□□ -1.97
CCDC30-201ENST00000340612 PTCHD1Q96NR3 888 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 KCNJ15Q99712 375 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 METTL22Q9BUU2 404 aaPredicted RBP2.75□□□□□ -1.97
CCDC30-201ENST00000340612 PRDM7Q9NQW5 492 aa2.75□□□□□ -1.97
CCDC30-201ENST00000340612 SMC4Q9NTJ3 1288 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms