RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 FAM205CA6NFA0 338 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 KIF3CO14782 793 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 ADAMTS3O15072 1205 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 CYTH3O43739 400 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 LIFRP42702 1097 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 PPFIBP1Q86W92 1011 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 ADGRF4Q8IZF3 695 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 SLC35F6Q8N357 371 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 TBC1D5Q92609 795 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 MIEF2Q96C03 454 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 ATG4CQ96DT6 458 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 BCCIPQ9P287 314 aaKnown RBP eCLIP11.47□□□□□ -0.57
ABCF1-201ENST00000326195 BIN2Q9UBW5 565 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-201ENST00000326195 HPCAL4Q9UM19 191 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 SNCAIPQ9Y6H5 919 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 KIF13BQ9NQT8 1826 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 TULP1O00294 542 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-201ENST00000326195 AOC2O75106 756 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 FNTAP49354 379 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 FKBP1CQ5VVH2 108 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 GBP6Q6ZN66 633 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 KIRREL3Q8IZU9 778 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 CEP112Q8N8E3 955 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 PRPF38AQ8NAV1 312 aaKnown RBP11.47□□□□□ -0.57
ABCF1-201ENST00000326195 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 CPLX3Q8WVH0 158 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 POLD4Q9HCU8 107 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 GOPCQ9HD26 462 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 BRCA1P38398 1863 aaKnown RBP11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 EBAG9O00559 213 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 FOXN1O15353 648 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 VCAM1P19320 739 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 RILPL1Q5EBL4 403 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 USP17L6PQ6QN14 398 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 NOSTRINQ8IVI9 506 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 BCAS4Q8TDM0 211 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 MAD2L2Q9UI95 211 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 ADGRG1Q9Y653 693 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 MYH7P12883 1935 aa11.47□□□□□ -0.57
ABCF1-201ENST00000326195 CCL15-CCL14A0A0B4J2E2 113 aa11.46□□□□□ -0.57
ABCF1-201ENST00000326195 GOLGA6L9A6NEM1 432 aa11.46□□□□□ -0.57
ABCF1-201ENST00000326195 SHOX2O60902 331 aaPredicted RBP11.46□□□□□ -0.57
ABCF1-201ENST00000326195 MYBL2P10244 700 aa11.46□□□□□ -0.57
ABCF1-201ENST00000326195 INHBEP58166 350 aa11.46□□□□□ -0.57
ABCF1-201ENST00000326195 CCL15Q16663 113 aa11.46□□□□□ -0.57
ABCF1-201ENST00000326195 LRCH2Q5VUJ6 765 aa11.46□□□□□ -0.57
ABCF1-201ENST00000326195 TMED8Q6PL24 325 aaPredicted RBP11.46□□□□□ -0.57
ABCF1-201ENST00000326195 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.46□□□□□ -0.572e-6■■□□□ 12.8
ABCF1-201ENST00000326195 ZC3H15Q8WU90 426 aaKnown RBP11.46□□□□□ -0.57
ABCF1-201ENST00000326195 SBF1O95248 1867 aa11.46□□□□□ -0.57
ABCF1-201ENST00000326195 RBAK-RBAKDNI3L0D1 243 aa11.46□□□□□ -0.58
ABCF1-201ENST00000326195 DEXIO95424 95 aa11.46□□□□□ -0.58
ABCF1-201ENST00000326195 AARSP49588 968 aaKnown RBP eCLIP11.46□□□□□ -0.584e-6■■■□□ 17.5
ABCF1-201ENST00000326195 SLC35G1Q2M3R5 365 aa11.46□□□□□ -0.58
ABCF1-201ENST00000326195 NAIF1Q69YI7 327 aaPredicted RBP11.46□□□□□ -0.58
ABCF1-201ENST00000326195 SLC30A10Q6XR72 485 aa11.46□□□□□ -0.58
ABCF1-201ENST00000326195 FAM43BQ6ZT52 329 aaPredicted RBP11.46□□□□□ -0.58
ABCF1-201ENST00000326195 RRP36Q96EU6 259 aaKnown RBP11.46□□□□□ -0.58
ABCF1-201ENST00000326195 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.58
ABCF1-201ENST00000326195 PCDHA5Q9Y5H7 936 aa11.46□□□□□ -0.58
ABCF1-201ENST00000326195 PCDHA1Q9Y5I3 950 aa11.46□□□□□ -0.58
ABCF1-201ENST00000326195 BACE1P56817 501 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 EEPD1Q7L9B9 569 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 TRMT44Q8IYL2 757 aaKnown RBP11.45□□□□□ -0.58
ABCF1-201ENST00000326195 VCPKMTQ9H867 229 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 GRIN2DO15399 1336 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-201ENST00000326195 CALML3P27482 149 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 STAT2P52630 851 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 KANK3Q6NY19 840 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 TMEM260Q9NX78 707 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 PGAP2Q9UHJ9 254 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 MCM8Q9UJA3 840 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 TEX33O43247 280 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 PPP6R2O75170 966 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 CCDC175P0C221 793 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 ELF1P32519 619 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 GJA5P36382 358 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 SP4Q02446 784 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 ZNF543Q08ER8 600 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 CDC37Q16543 378 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-201ENST00000326195 SPECC1LQ69YQ0 1117 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 TMTC3Q6ZXV5 915 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 SGMS1Q86VZ5 419 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 NCAPG2Q86XI2 1143 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 N4BP2L2Q92802 583 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-201ENST00000326195 MED15Q96RN5 788 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 R3HDMLQ9H3Y0 253 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 TUBE1Q9UJT0 475 aa11.45□□□□□ -0.58
ABCF1-201ENST00000326195 ARAP2Q8WZ64 1704 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms