RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 NAALADL2Q58DX5 795 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 FAM160B2Q86V87 743 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 ERO1BQ86YB8 467 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 TMTC1Q8IUR5 882 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 NOC3LQ8WTT2 800 aaKnown RBP15.84■□□□□ 0.13
VRK3-201ENST00000316763 VPS16Q9H269 839 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 DDX41Q9UJV9 622 aaKnown RBP15.84■□□□□ 0.13
VRK3-201ENST00000316763 FEM1BQ9UK73 627 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 SOWAHDA6NJG2 315 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 PP2D1A8MPX8 630 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 WDR46O15213 610 aaKnown RBP15.84■□□□□ 0.13
VRK3-201ENST00000316763 PPP1R2P41236 205 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 ADCY7P51828 1080 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 AMPD3Q01432 767 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 ERCC6LQ2NKX8 1250 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 CREBRFQ8IUR6 639 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 REXO1Q8N1G1 1221 aaKnown RBP15.84■□□□□ 0.13
VRK3-201ENST00000316763 ZNF280CQ8ND82 737 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 AMNQ9BXJ7 453 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 THAP9Q9H5L6 903 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 AS3MTQ9HBK9 375 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 TAB2Q9NYJ8 693 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 MAGEC2Q9UBF1 373 aaPredicted RBP15.84■□□□□ 0.13
VRK3-201ENST00000316763 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 ADGRG1Q9Y653 693 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 TLL2Q9Y6L7 1015 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 SPDYE5A6NIY4 337 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 EFCAB8A8MWE9 144 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 GYPCP04921 128 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 FECHP22830 423 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 CLK2P49760 499 aaKnown RBP15.83■□□□□ 0.12
VRK3-201ENST00000316763 USP14P54578 494 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 BACE1P56817 501 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 SPP2Q13103 211 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 MTMR2Q13614 643 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 FBXO38Q6PIJ6 1188 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 OPTNQ96CV9 577 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 DHTKD1Q96HY7 919 aaPredicted RBP15.83■□□□□ 0.12
VRK3-201ENST00000316763 DESI2Q9BSY9 194 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 RANBP17Q9H2T7 1088 aaKnown RBP15.83■□□□□ 0.12
VRK3-201ENST00000316763 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 AFG3L2Q9Y4W6 797 aa15.83■□□□□ 0.12
VRK3-201ENST00000316763 COBLO75128 1261 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 EEF1GP26641 437 aaKnown RBP15.82■□□□□ 0.12
VRK3-201ENST00000316763 PPATQ06203 517 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 FBXO11Q86XK2 927 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 GIMAP8Q8ND71 665 aaPredicted RBP15.82■□□□□ 0.12
VRK3-201ENST00000316763 CUL5Q93034 780 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 GLT8D2Q9H1C3 349 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 ARGLU1Q9NWB6 273 aaPredicted RBP15.82■□□□□ 0.12
VRK3-201ENST00000316763 ABT1Q9ULW3 272 aaKnown RBP15.82■□□□□ 0.12
VRK3-201ENST00000316763 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 KLRC4O43908 158 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 PLCG1P19174 1290 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 GJA5P36382 358 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 APLP1P51693 650 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 MRPL12P52815 198 aaKnown RBP15.82■□□□□ 0.12
VRK3-201ENST00000316763 SNAP25P60880 206 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 UBXN1Q04323 297 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 ARHGAP29Q52LW3 1261 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 CYP26C1Q6V0L0 522 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 RAD9BQ6WBX8 426 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 TBCKQ8TEA7 893 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 C12orf42Q96LP6 360 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 WDR24Q96S15 920 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 PLIN2Q99541 437 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 CARD6Q9BX69 1037 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 PSTPIP2Q9H939 334 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 EXOC1Q9NV70 894 aa15.82■□□□□ 0.12
VRK3-201ENST00000316763 PTPRFP10586 1907 aa15.81■□□□□ 0.12
VRK3-201ENST00000316763 BICDL2A1A5D9 508 aa15.81■□□□□ 0.12
VRK3-201ENST00000316763 KIF5CO60282 957 aa15.81■□□□□ 0.12
VRK3-201ENST00000316763 VCAM1P19320 739 aa15.81■□□□□ 0.12
VRK3-201ENST00000316763 FXR1P51114 621 aaKnown RBP eCLIP15.81■□□□□ 0.12
VRK3-201ENST00000316763 MTF1Q14872 753 aa15.81■□□□□ 0.12
VRK3-201ENST00000316763 TRIM47Q96LD4 638 aa15.81■□□□□ 0.12
VRK3-201ENST00000316763 C7orf25Q9BPX7 421 aa15.81■□□□□ 0.12
VRK3-201ENST00000316763 FBXO28Q9NVF7 368 aa15.81■□□□□ 0.12
VRK3-201ENST00000316763 BIN2Q9UBW5 565 aaPredicted RBP15.81■□□□□ 0.12
VRK3-201ENST00000316763 C19orf81C9J6K1 198 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 IRF6O14896 467 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 TADA3O75528 432 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 H2AFXP16104 143 aaPredicted RBP15.8■□□□□ 0.12
VRK3-201ENST00000316763 TRAF1Q13077 416 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 PPIL2Q13356 520 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 TUBB2AQ13885 445 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 TMEM266Q2M3C6 531 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 JAKMIP3Q5VZ66 844 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 RGMBQ6NW40 437 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 TEX2Q8IWB9 1127 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 FAM114A1Q8IWE2 563 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 KIFC2Q96AC6 838 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 WNK4Q96J92 1243 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 TUBB2BQ9BVA1 445 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 MRPL44Q9H9J2 332 aaKnown RBP15.8■□□□□ 0.12
VRK3-201ENST00000316763 ABHD10Q9NUJ1 306 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 TMEM260Q9NX78 707 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 A0A1W2PQC6 194 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms