RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 KLF18A0A0U1RQI7 1052 aa22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 SPATA31C2B4DYI2 1134 aa22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 ZBTB43O43298 467 aa22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 HMGB1P09429 215 aaKnown RBP22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 DGKDQ16760 1214 aa22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 RTN1Q16799 776 aa22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 PCNX4Q63HM2 1172 aa22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 DHX37Q8IY37 1157 aaKnown RBP22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 TTYH1Q9H313 450 aaPredicted RBP22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 RBM28Q9NW13 759 aaKnown RBP22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 TELO2Q9Y4R8 837 aa22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 EYSQ5T1H1 3165 aa22.84■■□□□ 1.25
PDZRN3-202ENST00000308537 STAM2O75886 525 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 SUPT20HL2P0C7V6 817 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 ZNF286BP0CG31 522 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 CASTP20810 708 aaKnown RBP22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 HIC1Q14526 733 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 UBE2SQ16763 222 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 FAM47CQ5HY64 1035 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 GDF6Q6KF10 455 aaPredicted RBP22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 SMARCC2Q8TAQ2 1214 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 SCLYQ96I15 445 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 JAKMIP1Q96N16 626 aaKnown RBP22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 C16orf70Q9BSU1 422 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 PSTPIP2Q9H939 334 aa22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 CXXC1Q9P0U4 656 aaPredicted RBP22.83■■□□□ 1.25
PDZRN3-202ENST00000308537 EPB41L2O43491 1005 aaKnown RBP22.82■■□□□ 1.24
PDZRN3-202ENST00000308537 SORBS3O60504 671 aa22.82■■□□□ 1.24
PDZRN3-202ENST00000308537 PSRC1Q6PGN9 363 aaPredicted RBP22.82■■□□□ 1.24
PDZRN3-202ENST00000308537 Q6ZUG5 572 aa22.82■■□□□ 1.24
PDZRN3-202ENST00000308537 HERVK_113Q902F9 699 aa22.82■■□□□ 1.24
PDZRN3-202ENST00000308537 DHX38Q92620 1227 aaKnown RBP22.82■■□□□ 1.24
PDZRN3-202ENST00000308537 RTEL1Q9NZ71 1219 aa22.82■■□□□ 1.24
PDZRN3-202ENST00000308537 GTF2IRD1Q9UHL9 959 aa22.82■■□□□ 1.24
PDZRN3-202ENST00000308537 GOLGA8AA7E2F4 631 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 GOLGA8BA8MQT2 603 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 PPFIA4O75335 1185 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 REC8O95072 547 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 RPS6KB1P23443 525 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 PSEN2P49810 448 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 APOBRQ0VD83 1088 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 SYNE3Q6ZMZ3 975 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 PPP4R2Q9NY27 417 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 HDAC6Q9UBN7 1215 aa22.81■■□□□ 1.24
PDZRN3-202ENST00000308537 MYO9BQ13459 2157 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 RBAK-RBAKDNI3L0D1 243 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 PITPNM1O00562 1244 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 FIBPO43427 364 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 ADD1P35611 737 aaKnown RBP22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 EVCP57679 992 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 GPNMBQ14956 572 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 ERICH6BQ5W0A0 696 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 XRRA1Q6P2D8 792 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 HEATR3Q7Z4Q2 680 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 BRF1Q92994 677 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 CUL5Q93034 780 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 SPATA33Q96N06 139 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 USP26Q9BXU7 913 aa22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 V9GY48 417 aaPredicted RBP22.8■■□□□ 1.24
PDZRN3-202ENST00000308537 CHD7Q9P2D1 2997 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 STXBP3O00186 592 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 ITGB5P18084 799 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 HOXC8P31273 242 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 RBL2Q08999 1139 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 MFSD10Q14728 455 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 KIAA0753Q2KHM9 967 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 GNPTABQ3T906 1256 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 BLOC1S2Q6QNY1 142 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 METTL7BQ6UX53 244 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 WNT8BQ93098 351 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 SEMA6BQ9H3T3 888 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 STXBP5LQ9Y2K9 1186 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 UBIAD1Q9Y5Z9 338 aa22.79■■□□□ 1.24
PDZRN3-202ENST00000308537 PTPRSQ13332 1948 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 GRXCR1A8MXD5 290 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 ADAMTS3O15072 1205 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 ATP9AO75110 1047 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 IQCF3P0C7M6 154 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 NTRK3Q16288 839 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 PTGISQ16647 500 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 PPP1R18Q6NYC8 613 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 FAM161BQ96MY7 647 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 SENP7Q9BQF6 1050 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 RIC8AQ9NPQ8 531 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 PCDHA6Q9UN73 950 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 PCDHA8Q9Y5H6 950 aa22.78■■□□□ 1.24
PDZRN3-202ENST00000308537 KCNA2P16389 499 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 CLK2P49760 499 aaKnown RBP22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 PKN1Q16512 942 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 TRIM71Q2Q1W2 868 aaKnown RBP22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 ZNF697Q5TEC3 545 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 TRAF7Q6Q0C0 670 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 CYFIP1Q7L576 1253 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 GPR20Q99678 358 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 ALG1Q9BT22 464 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 ZSWIM6Q9HCJ5 1215 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 BARHL2Q9NY43 387 aa22.77■■□□□ 1.24
PDZRN3-202ENST00000308537 FGBP02675 491 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms