RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 IDI1Q13907 227 aa17.09■□□□□ 0.33
PPM1E-201ENST00000308249 SLC26A7Q8TE54 656 aa17.09■□□□□ 0.33
PPM1E-201ENST00000308249 RUNDC3BQ96NL0 473 aa17.09■□□□□ 0.33
PPM1E-201ENST00000308249 EIF3CQ99613 913 aaKnown RBP17.09■□□□□ 0.33
PPM1E-201ENST00000308249 UBN2Q6ZU65 1347 aa17.09■□□□□ 0.33
PPM1E-201ENST00000308249 CARSP49589 748 aaKnown RBP17.09■□□□□ 0.33
PPM1E-201ENST00000308249 IMPG1Q17R60 797 aa17.09■□□□□ 0.33
PPM1E-201ENST00000308249 SMYD3Q9H7B4 428 aa17.09■□□□□ 0.33
PPM1E-201ENST00000308249 CREB3O43889 395 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 SEC31AO94979 1220 aaKnown RBP17.08■□□□□ 0.33
PPM1E-201ENST00000308249 PARP10Q53GL7 1025 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 DCPSQ96C86 337 aaKnown RBP17.08■□□□□ 0.33
PPM1E-201ENST00000308249 CENPKQ9BS16 269 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 AP5M1Q9H0R1 490 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 BTG4Q9NY30 223 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 HSPA4LO95757 839 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 DRP2Q13474 957 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 ST13P4Q8IZP2 240 aaPredicted RBP17.08■□□□□ 0.33
PPM1E-201ENST00000308249 RRAGDQ9NQL2 400 aaPredicted RBP17.08■□□□□ 0.33
PPM1E-201ENST00000308249 GINM1Q9NU53 330 aa17.08■□□□□ 0.33
PPM1E-201ENST00000308249 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
PPM1E-201ENST00000308249 NEK2P51955 445 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 MXD4Q14582 209 aaPredicted RBP17.08■□□□□ 0.32
PPM1E-201ENST00000308249 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 DDX28Q9NUL7 540 aaKnown RBP17.08■□□□□ 0.32
PPM1E-201ENST00000308249 SNX5Q9Y5X3 404 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 CD58P19256 250 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 OTUD7AQ8TE49 926 aaPredicted RBP17.08■□□□□ 0.32
PPM1E-201ENST00000308249 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.32
PPM1E-201ENST00000308249 TPCN1Q9ULQ1 816 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 PSMC1P62191 440 aaKnown RBP17.08■□□□□ 0.32
PPM1E-201ENST00000308249 C2orf54Q08AI8 447 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 CDO1Q16878 200 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 DOK7Q18PE1 504 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 BBS9Q3SYG4 887 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 PDXDC1Q6P996 788 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 EPAS1Q99814 870 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 SARS2Q9NP81 518 aaKnown RBP17.08■□□□□ 0.32
PPM1E-201ENST00000308249 ABCC5O15440 1437 aa17.08■□□□□ 0.32
PPM1E-201ENST00000308249 NEMP1O14524 444 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 ECEL1O95672 775 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 LMNAP02545 664 aaKnown RBP17.07■□□□□ 0.32
PPM1E-201ENST00000308249 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 MCF2L2Q86YR7 1114 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 LPIN2Q92539 896 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 SNX2O60749 519 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 RPN1P04843 607 aaKnown RBP17.07■□□□□ 0.32
PPM1E-201ENST00000308249 CXCR5P32302 372 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 RNF219Q5W0B1 726 aaPredicted RBP17.07■□□□□ 0.32
PPM1E-201ENST00000308249 HSPH1Q92598 858 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
PPM1E-201ENST00000308249 DPY19L2Q6NUT2 758 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 SCARA5Q6ZMJ2 495 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 SEC24BO95487 1268 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 OR52Z1P0C646 297 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 PABPC4Q13310 644 aaKnown RBP eCLIP17.07■□□□□ 0.32
PPM1E-201ENST00000308249 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 C10orf76Q5T2E6 689 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 ZNF513Q8N8E2 541 aaPredicted RBP17.07■□□□□ 0.32
PPM1E-201ENST00000308249 FGFR1OP2Q9NVK5 253 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 hCG_2014768A0A024R1R8 64 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 CERKLQ49MI3 558 aaPredicted RBP17.07■□□□□ 0.32
PPM1E-201ENST00000308249 ADALQ6DHV7 355 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 SYNDIG1Q9H7V2 258 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 PCDH11XQ9BZA7 1347 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 PCDH11YQ9BZA8 1340 aa17.07■□□□□ 0.32
PPM1E-201ENST00000308249 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 NSD2O96028 1365 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 TADA3O75528 432 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
PPM1E-201ENST00000308249 KRT14P02533 472 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 KITP10721 976 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 BPIFB4P59827 614 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 PATL1Q86TB9 770 aaKnown RBP17.06■□□□□ 0.32
PPM1E-201ENST00000308249 PLBD2Q8NHP8 589 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 KIAA1024Q9UPX6 916 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 USP17L12C9JPN9 530 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 TMEM232C9JQI7 657 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 USP17L21D6R901 530 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 ZNF263O14978 683 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 PRPSAP2O60256 369 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 AFF4Q9UHB7 1163 aaKnown RBP17.06■□□□□ 0.32
PPM1E-201ENST00000308249 EXOC1LA0A1B0GW35 172 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 F8W8V4 182 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 DNAJC24Q6P3W2 148 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 NEK8Q86SG6 692 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 ZC3H18Q86VM9 953 aaKnown RBP17.06■□□□□ 0.32
PPM1E-201ENST00000308249 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 CDCA7Q9BWT1 371 aaPredicted RBP17.06■□□□□ 0.32
PPM1E-201ENST00000308249 GTSE1Q9NYZ3 720 aa17.06■□□□□ 0.32
PPM1E-201ENST00000308249 STX18Q9P2W9 335 aaKnown RBP17.06■□□□□ 0.32
PPM1E-201ENST00000308249 ZNF233A6NK53 670 aa17.05■□□□□ 0.32
PPM1E-201ENST00000308249 E7EWF7 191 aa17.05■□□□□ 0.32
PPM1E-201ENST00000308249 M0R2C6 588 aa17.05■□□□□ 0.32
PPM1E-201ENST00000308249 TRIM37O94972 964 aa17.05■□□□□ 0.32
PPM1E-201ENST00000308249 PLEKHM3Q6ZWE6 761 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms