RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 TEX11Q8IYF3 940 aa18.33■□□□□ 0.52
SSH3-201ENST00000308127 E9PMD0 336 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 HSF2BPO75031 334 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 ACTN1P12814 892 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 UNC13DQ70J99 1090 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 NOX5Q96PH1 765 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 LAD1O00515 517 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 BACH1O14867 736 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 GNPATO15228 680 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 GNA11P29992 359 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 SCN7AQ01118 1682 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 PPFIA1Q13136 1202 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 NNTQ13423 1086 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 ZNF662Q6ZS27 426 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 DDX42Q86XP3 938 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSH3-201ENST00000308127 OR2W6PQ8NHA6 318 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 A0A087X0T9 212 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 EBAG9O00559 213 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 FAM228BP0C875 321 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 TCP1P17987 556 aaKnown RBP18.32■□□□□ 0.52
SSH3-201ENST00000308127 HPDP32754 393 aaPredicted RBP18.32■□□□□ 0.52
SSH3-201ENST00000308127 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 CUEDC2Q9H467 287 aa18.32■□□□□ 0.52
SSH3-201ENST00000308127 NOL4O94818 638 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 SEC24CP53992 1094 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 EPHB4P54760 987 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 SF3A3Q12874 501 aaKnown RBP eCLIP18.31■□□□□ 0.529e-8■■■■■ 28.3
SSH3-201ENST00000308127 TADA2BQ86TJ2 420 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 BCAS3Q9H6U6 928 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 KIAA1551Q9HCM1 1747 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 EIF3HO15372 352 aaKnown RBP eCLIP18.31■□□□□ 0.52
SSH3-201ENST00000308127 FIGNQ5HY92 759 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 RAD54LQ92698 747 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 MYH1P12882 1939 aa18.31■□□□□ 0.52
SSH3-201ENST00000308127 ZNF233A6NK53 670 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 NDUFAB1O14561 156 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 SHOX2O60902 331 aaPredicted RBP18.3■□□□□ 0.52
SSH3-201ENST00000308127 BAG3O95817 575 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 STAT3P40763 770 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 KIAA0753Q2KHM9 967 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 CLEC4GQ6UXB4 293 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 PPM1EQ8WY54 764 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
SSH3-201ENST00000308127 ANKRD2Q9GZV1 360 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 CDK17Q00537 523 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 COASYQ13057 564 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 KRT79Q5XKE5 535 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 CASKIN2Q8WXE0 1202 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 MTMR9Q96QG7 549 aa18.3■□□□□ 0.52
SSH3-201ENST00000308127 HNRNPH3P31942 346 aaKnown RBP18.29■□□□□ 0.52
SSH3-201ENST00000308127 HLTFQ14527 1009 aaKnown RBP eCLIP18.29■□□□□ 0.52
SSH3-201ENST00000308127 ASTE1Q2TB18 679 aaPredicted RBP18.29■□□□□ 0.52
SSH3-201ENST00000308127 SFMBT2Q5VUG0 894 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
SSH3-201ENST00000308127 GALNT17Q6IS24 598 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 MAATS1Q7Z4T9 603 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 SPZ1Q9BXG8 430 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 AP1M1Q9BXS5 423 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 TAL1P17542 331 aaPredicted RBP18.29■□□□□ 0.52
SSH3-201ENST00000308127 TM4SF1P30408 202 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 FAM98CQ17RN3 349 aaKnown RBP18.29■□□□□ 0.52
SSH3-201ENST00000308127 TMEM266Q2M3C6 531 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 CFAP221Q4G0U5 840 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 CFAP58Q5T655 872 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 CCDC84Q86UT8 332 aaPredicted RBP18.29■□□□□ 0.52
SSH3-201ENST00000308127 MYOCDQ8IZQ8 938 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 GUF1Q8N442 669 aaKnown RBP18.29■□□□□ 0.52
SSH3-201ENST00000308127 ANKS1AQ92625 1134 aa18.29■□□□□ 0.52
SSH3-201ENST00000308127 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 GTF2A1P52655 376 aaPredicted RBP18.28■□□□□ 0.52
SSH3-201ENST00000308127 RTFDC1Q9BY42 306 aaPredicted RBP18.28■□□□□ 0.52
SSH3-201ENST00000308127 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 POTEB3A0JP26 581 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 POTECB2RU33 542 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 TULP1O00294 542 aaPredicted RBP18.28■□□□□ 0.52
SSH3-201ENST00000308127 RAD51CO43502 376 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 ERLIN2O94905 339 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 POTEBQ6S5H4 581 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 PANK4Q9NVE7 773 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 KIAA1024Q9UPX6 916 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 COL4A3BPQ9Y5P4 624 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 KCNK3O14649 394 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 IBSPP21815 317 aaPredicted RBP18.28■□□□□ 0.52
SSH3-201ENST00000308127 ADCY7P51828 1080 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 KCTD1Q719H9 257 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 TSG101Q99816 390 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 SH3GL2Q99962 352 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 IKZF4Q9H2S9 585 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 MAGEF1Q9HAY2 307 aa18.28■□□□□ 0.52
SSH3-201ENST00000308127 LAMB1P07942 1786 aa18.27■□□□□ 0.52
SSH3-201ENST00000308127 GOLGA8KD6RF30 607 aa18.27■□□□□ 0.52
SSH3-201ENST00000308127 MEIS1O00470 390 aa18.27■□□□□ 0.52
SSH3-201ENST00000308127 OPA1O60313 960 aa18.27■□□□□ 0.52
SSH3-201ENST00000308127 SNAP25P60880 206 aa18.27■□□□□ 0.52
SSH3-201ENST00000308127 HERC4Q5GLZ8 1057 aaPredicted RBP18.27■□□□□ 0.52
SSH3-201ENST00000308127 FAM26FQ5R3K3 315 aa18.27■□□□□ 0.52
SSH3-201ENST00000308127 USP17L15C9J2P7 530 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms