RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TBC1D9BQ66K14 1250 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 SMYD5Q6GMV2 418 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 GBP6Q6ZN66 633 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 IRF2BP2Q7Z5L9 587 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 IQCA1Q86XH1 822 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 SLC30A5Q8TAD4 765 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 WDR66Q8TBY9 1149 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 ATXN2LQ8WWM7 1075 aaKnown RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 MS4A14Q96JA4 679 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 JPH2Q9BR39 696 aaPredicted RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 UBAC1Q9BSL1 405 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 CRNKL1Q9BZJ0 848 aaKnown RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 PLCB1Q9NQ66 1216 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 NIP7Q9Y221 180 aaKnown RBP eCLIP6.05□□□□□ -1.44
VPS50-202ENST00000305866 RLFQ13129 1914 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 ANK1P16157 1881 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 PVALEFA0A1B0GWK0 134 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 GRID2IPA4D2P6 1211 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 TRAPPC3O43617 180 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 NCK2O43639 380 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 KRT14P02533 472 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 TDO2P48775 406 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 DNM2P50570 870 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 RHBDL3P58872 404 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 RPS8P62241 208 aaKnown RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 GSTO1P78417 241 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 PPP4R3AQ6IN85 833 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 EMBQ6PCB8 327 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 MOXD1Q6UVY6 613 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 BLIDQ8IZY5 108 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 MYCBPAPQ8TBZ2 947 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 NUDT12Q9BQG2 462 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 NUP58Q9BVL2 599 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 STIM2Q9P246 746 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 SLC12A4Q9UP95 1085 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 V9GY48 417 aaPredicted RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 GOLGA8KD6RF30 607 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 MEFVO15553 781 aaPredicted RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 CCNE1P24864 410 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 CCT5P48643 541 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 XRCC4Q13426 336 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 GRAPQ13588 217 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 NAB2Q15742 525 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 NFIL3Q16649 462 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 GALNTL6Q49A17 601 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 PDXDC1Q6P996 788 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 RPAINQ86UA6 219 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 GRAPLQ8TC17 118 aaPredicted RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 CELF1Q92879 486 aaKnown RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 HPS3Q969F9 1004 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 TUBGCP2Q9BSJ2 902 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 EXOC1Q9NV70 894 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 SWAP70Q9UH65 585 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 ATF5Q9Y2D1 282 aaPredicted RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 SSU72P8A0A1W2PR75 194 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 MOCS3O95396 460 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 RASA1P20936 1047 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 POLD1P28340 1107 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 SMTNP53814 917 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 SLC7A5Q01650 507 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 ZNF844Q08AG5 666 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 GLE1Q53GS7 698 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 DNAJC21Q5F1R6 531 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 NFXL1Q6ZNB6 911 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 EPM2AIP1Q7L775 607 aaPredicted RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 CCDC155Q8N6L0 562 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 ZNF473Q8WTR7 871 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 P2RX5Q93086 422 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 GDAP1L1Q96MZ0 367 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 CCDC134Q9H6E4 229 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS50-202ENST00000305866 AIPL1Q9NZN9 384 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 GUCA1BQ9UMX6 200 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 GOLGB1Q14789 3259 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 A0A0G2JMZ2 1700 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 LRRC37A2A6NM11 1700 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 HIBADHP31937 336 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 EPHB4P54760 987 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 MRPS25P82663 173 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 HDLBPQ00341 1268 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 UBXN1Q04323 297 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 PSMD2Q13200 908 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 GRIK5Q16478 980 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 CDC37Q16543 378 aaPredicted RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 PIGWQ7Z7B1 504 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 C3orf20Q8ND61 904 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 CCDC148Q8NFR7 591 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 RBM46Q8TBY0 533 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 CCDC85AQ96PX6 553 aaPredicted RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 P2RX7Q99572 595 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 CAPS2Q9BXY5 557 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 STK17AQ9UEE5 414 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 DDX20Q9UHI6 824 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 PCNTO95613 3336 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 MYMKA6NI61 221 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 UBAP1LF5GYI3 381 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 ERLIN1O75477 346 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 CYP2D6P10635 497 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 DRD4P21917 467 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 SLC1A4P43007 532 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms