RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CDC42EP5Q6NZY7 148 aa27.83■■■□□ 2.04
ROM1-201ENST00000278833 DDX12PQ92771 950 aa27.83■■■□□ 2.04
ROM1-201ENST00000278833 DNAJC19Q96DA6 116 aa27.83■■■□□ 2.04
ROM1-201ENST00000278833 CYP3A7-CYP3A51PA0A087WV96 503 aa27.82■■■□□ 2.04
ROM1-201ENST00000278833 TARSL2A2RTX5 802 aaKnown RBP27.82■■■□□ 2.04
ROM1-201ENST00000278833 CYP3A7P24462 503 aa27.82■■■□□ 2.04
ROM1-201ENST00000278833 DCAF4Q8WV16 495 aa27.82■■■□□ 2.04
ROM1-201ENST00000278833 TEKT1Q969V4 418 aa27.82■■■□□ 2.04
ROM1-201ENST00000278833 ZC3H12CQ9C0D7 883 aaKnown RBP27.82■■■□□ 2.04
ROM1-201ENST00000278833 ZNF219Q9P2Y4 722 aaPredicted RBP27.82■■■□□ 2.04
ROM1-201ENST00000278833 NPM3O75607 178 aaKnown RBP27.81■■■□□ 2.04
ROM1-201ENST00000278833 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.81■■■□□ 2.04
ROM1-201ENST00000278833 C21orf2O43822 256 aa27.81■■■□□ 2.04
ROM1-201ENST00000278833 USP11P51784 963 aa27.81■■■□□ 2.04
ROM1-201ENST00000278833 MARSP56192 900 aaKnown RBP27.81■■■□□ 2.04
ROM1-201ENST00000278833 APOBEC3HQ6NTF7 200 aaKnown RBP27.81■■■□□ 2.04
ROM1-201ENST00000278833 KCNK18Q7Z418 384 aa27.81■■■□□ 2.04
ROM1-201ENST00000278833 C7orf43Q8WVR3 580 aa27.81■■■□□ 2.04
ROM1-201ENST00000278833 HPS3Q969F9 1004 aa27.81■■■□□ 2.04
ROM1-201ENST00000278833 CEP63Q96MT8 703 aa27.81■■■□□ 2.04
ROM1-201ENST00000278833 NUDT12Q9BQG2 462 aa27.81■■■□□ 2.04
ROM1-201ENST00000278833 ATP1A1P05023 1023 aaKnown RBP27.8■■■□□ 2.04
ROM1-201ENST00000278833 USP14P54578 494 aa27.8■■■□□ 2.04
ROM1-201ENST00000278833 GPS2Q13227 327 aa27.8■■■□□ 2.04
ROM1-201ENST00000278833 ZNF572Q7Z3I7 529 aaPredicted RBP27.8■■■□□ 2.04
ROM1-201ENST00000278833 ZC3H3Q8IXZ2 948 aaKnown RBP27.8■■■□□ 2.04
ROM1-201ENST00000278833 MYOCDQ8IZQ8 938 aa27.8■■■□□ 2.04
ROM1-201ENST00000278833 LACRTQ9GZZ8 138 aa27.8■■■□□ 2.04
ROM1-201ENST00000278833 NYAP2Q9P242 653 aa27.8■■■□□ 2.04
ROM1-201ENST00000278833 EIF3JO75822 258 aaKnown RBP27.79■■■□□ 2.04
ROM1-201ENST00000278833 VSNL1P62760 191 aa27.79■■■□□ 2.04
ROM1-201ENST00000278833 ITIH3Q06033 890 aa27.79■■■□□ 2.04
ROM1-201ENST00000278833 COASYQ13057 564 aa27.79■■■□□ 2.04
ROM1-201ENST00000278833 UBE2SQ16763 222 aa27.79■■■□□ 2.04
ROM1-201ENST00000278833 NOA1Q8NC60 698 aaKnown RBP27.79■■■□□ 2.04
ROM1-201ENST00000278833 PCMTD1Q96MG8 357 aaPredicted RBP27.79■■■□□ 2.04
ROM1-201ENST00000278833 ZDHHC15Q96MV8 337 aa27.79■■■□□ 2.04
ROM1-201ENST00000278833 DHX36Q9H2U1 1008 aaKnown RBP27.79■■■□□ 2.04
ROM1-201ENST00000278833 PSTPIP2Q9H939 334 aa27.79■■■□□ 2.04
ROM1-201ENST00000278833 KCNMB3Q9NPA1 279 aa27.79■■■□□ 2.04
ROM1-201ENST00000278833 PSD3Q9NYI0 1048 aa27.79■■■□□ 2.04
ROM1-201ENST00000278833 CCDC66A2RUB6 948 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 RCCD1A6NED2 376 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 PRLRP16471 622 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 KIF5AQ12840 1032 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 AP3B2Q13367 1082 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 SPA17Q15506 151 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 NCAPH2Q6IBW4 605 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 CLEC10AQ8IUN9 316 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 RUBCNQ92622 972 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 CCDC42Q96M95 316 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 ABCB6Q9NP58 842 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 PJA2O43164 708 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 GNA14O95837 355 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 HDLBPQ00341 1268 aaKnown RBP27.78■■■□□ 2.04
ROM1-201ENST00000278833 MAPK8IP2Q13387 824 aaPredicted RBP27.78■■■□□ 2.04
ROM1-201ENST00000278833 CCDC96Q2M329 555 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 TTBK2Q6IQ55 1244 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 DYMQ7RTS9 669 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 TXLNBQ8N3L3 684 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 TRIM58Q8NG06 486 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 BAP1Q92560 729 aa27.78■■■□□ 2.04
ROM1-201ENST00000278833 SYN2Q92777 582 aaPredicted RBP27.78■■■□□ 2.04
ROM1-201ENST00000278833 NUCKS1Q9H1E3 243 aaKnown RBP27.78■■■□□ 2.04
ROM1-201ENST00000278833 SSU72P8A0A1W2PR75 194 aa27.77■■■□□ 2.04
ROM1-201ENST00000278833 USP17L10C9JJH3 530 aa27.77■■■□□ 2.04
ROM1-201ENST00000278833 ZNF263O14978 683 aa27.77■■■□□ 2.04
ROM1-201ENST00000278833 RIMBP2O15034 1052 aa27.77■■■□□ 2.04
ROM1-201ENST00000278833 USO1O60763 962 aaKnown RBP27.77■■■□□ 2.04
ROM1-201ENST00000278833 EIF6P56537 245 aaKnown RBP27.77■■■□□ 2.04
ROM1-201ENST00000278833 SECISBP2LQ93073 1101 aaKnown RBP27.77■■■□□ 2.04
ROM1-201ENST00000278833 ARHGAP20Q9P2F6 1191 aa27.77■■■□□ 2.04
ROM1-201ENST00000278833 FRMD3A2A2Y4 597 aa27.76■■■□□ 2.04
ROM1-201ENST00000278833 NKRFO15226 690 aaKnown RBP eCLIP27.76■■■□□ 2.04
ROM1-201ENST00000278833 FKBP3Q00688 224 aaKnown RBP27.76■■■□□ 2.04
ROM1-201ENST00000278833 ECM1Q16610 540 aa27.76■■■□□ 2.04
ROM1-201ENST00000278833 FAM26FQ5R3K3 315 aa27.76■■■□□ 2.04
ROM1-201ENST00000278833 CRYGNQ8WXF5 182 aa27.76■■■□□ 2.04
ROM1-201ENST00000278833 SH2D4AQ9H788 454 aa27.76■■■□□ 2.04
ROM1-201ENST00000278833 VIPAS39Q9H9C1 493 aa27.76■■■□□ 2.04
ROM1-201ENST00000278833 BMP2KQ9NSY1 1161 aaPredicted RBP27.76■■■□□ 2.04
ROM1-201ENST00000278833 PCDHA12Q9UN75 941 aa27.76■■■□□ 2.04
ROM1-201ENST00000278833 PITPNM2Q9BZ72 1349 aa27.76■■■□□ 2.04
ROM1-201ENST00000278833 TFRCP02786 760 aaKnown RBP27.76■■■□□ 2.03
ROM1-201ENST00000278833 IQCEQ6IPM2 695 aa27.76■■■□□ 2.03
ROM1-201ENST00000278833 TEX2Q8IWB9 1127 aa27.76■■■□□ 2.03
ROM1-201ENST00000278833 IDI2Q9BXS1 227 aa27.76■■■□□ 2.03
ROM1-201ENST00000278833 PCDHA2Q9Y5H9 948 aa27.76■■■□□ 2.03
ROM1-201ENST00000278833 COL4A3BPQ9Y5P4 624 aa27.76■■■□□ 2.03
ROM1-201ENST00000278833 COL2A1P02458 1487 aaPredicted RBP27.76■■■□□ 2.03
ROM1-201ENST00000278833 PDXDC1Q6P996 788 aa27.75■■■□□ 2.03
ROM1-201ENST00000278833 PODNQ7Z5L7 613 aa27.75■■■□□ 2.03
ROM1-201ENST00000278833 SLFN12Q8IYM2 578 aa27.75■■■□□ 2.03
ROM1-201ENST00000278833 DNAJC18Q9H819 358 aa27.75■■■□□ 2.03
ROM1-201ENST00000278833 JRKLQ9Y4A0 524 aa27.75■■■□□ 2.03
ROM1-201ENST00000278833 STK24Q9Y6E0 443 aa27.75■■■□□ 2.03
ROM1-201ENST00000278833 TBX3O15119 743 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 RHOXF2BP0C7M4 288 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 IDEP14735 1019 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 KIF11P52732 1056 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms