RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 IKBKGQ9Y6K9 419 aa18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 DDAH1O94760 285 aa18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 KRT15P19012 456 aa18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 CARSP49589 748 aaKnown RBP18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 ANKRD2Q9GZV1 360 aa18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 CCDC38Q502W7 563 aa18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 PPM1KQ8N3J5 372 aa18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 ARHGEF2Q92974 986 aaKnown RBP18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 SLC24A3Q9HC58 644 aa18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 CHORDC1Q9UHD1 332 aaPredicted RBP18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.39■□□□□ 0.53
UBE2R2-201ENST00000263228 ZSCAN5CA6NGD5 496 aaPredicted RBP18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 MYO1FO00160 1098 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 PPP1R14CQ8TAE6 165 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 GDAP1Q8TB36 358 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 CCDC77Q9BR77 488 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 ODF2LQ9ULJ1 636 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 L1RE1Q9UN81 338 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 PCDHA1Q9Y5I3 950 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 TMOD1P28289 359 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 HDAC7Q8WUI4 952 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 IL17RAQ96F46 866 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 ANKZF1Q9H8Y5 726 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 INTS13Q9NVM9 706 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.38■□□□□ 0.531e-6■□□□□ 10.8
UBE2R2-201ENST00000263228 CCDC160A6NGH7 325 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L15C9J2P7 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L13C9JLJ4 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L11C9JVI0 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L18D6R9N7 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L22D6RA61 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L17D6RBQ6 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L19D6RCP7 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L20D6RJB6 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 TDP2O95551 362 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 HDLBPQ00341 1268 aaKnown RBP18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L24Q0WX57 530 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 CYP4F22Q6NT55 531 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 ALKBH5Q6P6C2 394 aaKnown RBP18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 USP17L6PQ6QN14 398 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 KIRREL3Q8IZU9 778 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 ELAC2Q9BQ52 826 aaKnown RBP18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 SH2D3AQ9BRG2 576 aa18.38■□□□□ 0.53
UBE2R2-201ENST00000263228 VEGFAP15692 232 aaPredicted RBP18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 DPYDQ12882 1025 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 ZNF365Q70YC5 407 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 CCDC63Q8NA47 563 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 WDR66Q8TBY9 1149 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 SYNCQ9H7C4 482 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 INTS9Q9NV88 658 aaKnown RBP18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 A0A087X0B3 334 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 LACTBP83111 547 aaPredicted RBP18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 LRRC14Q15048 493 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 RBM12Q9NTZ6 932 aaKnown RBP18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 PPP1R3GB7ZBB8 358 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 N4BP2L2Q92802 583 aaPredicted RBP18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 ARL8AQ96BM9 186 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 ISCA1Q9BUE6 129 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 AMACRQ9UHK6 382 aa18.37■□□□□ 0.53
UBE2R2-201ENST00000263228 FGGP02679 453 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 STX2P32856 288 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 COPB2P35606 906 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 IRAK1P51617 712 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 MAGOHP61326 146 aaKnown RBP18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 HP1BP3Q5SSJ5 553 aaPredicted RBP18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 MMS22LQ6ZRQ5 1243 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 ZNF579Q8NAF0 562 aaKnown RBP18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 BANK1Q8NDB2 785 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 SH3RF3Q8TEJ3 882 aaPredicted RBP18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 PLVAPQ9BX97 442 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 COL4A3BPQ9Y5P4 624 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 GCKP35557 465 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 PIGOQ8TEQ8 1089 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 HPSEQ9Y251 543 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 ZNF804BA4D1E1 1349 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 SETD1AO15047 1707 aaKnown RBP18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 ACSL3O95573 720 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 KAZNQ674X7 775 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 ZNF746Q6NUN9 644 aaPredicted RBP18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 LRRC31Q6UY01 552 aa18.36■□□□□ 0.53
UBE2R2-201ENST00000263228 NPHP3-ACAD11A0A0J9YXS1 232 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 ARHGEF35A5YM69 484 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 HOXA13P31271 388 aaPredicted RBP18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 NSMFQ6X4W1 530 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 IQCGQ9H095 443 aaKnown RBP18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 USP40Q9NVE5 1235 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 MYCLP12524 364 aaPredicted RBP18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 ACTN1P12814 892 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 SETDB1Q15047 1291 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 HPCAL4Q9UM19 191 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 PALLDQ8WX93 1383 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 PPP1R2P41236 205 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
UBE2R2-201ENST00000263228 HAUS3Q68CZ6 603 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms