RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 TMEM206Q9H813 350 aa17.25■□□□□ 0.35
SHTN1-201ENST00000260777 GCNT4Q9P109 453 aa17.25■□□□□ 0.35
SHTN1-201ENST00000260777 GINS2Q9Y248 185 aa17.25■□□□□ 0.35
SHTN1-201ENST00000260777 IVNS1ABPQ9Y6Y0 642 aa17.25■□□□□ 0.35
SHTN1-201ENST00000260777 PIK3CAP42336 1068 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 SLC12A2P55011 1212 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 PLTPP55058 493 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 CUL1Q13616 776 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 SLMAPQ14BN4 828 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 KIAA0825Q8IV33 1275 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 ZNF653Q96CK0 615 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 CROCC2H7BZ55 1655 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 ERFEQ4G0M1 354 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 CC2D1AQ6P1N0 951 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 TMC4Q7Z404 712 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 DHX40Q8IX18 779 aaKnown RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 GBP5Q96PP8 586 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 NACC1Q96RE7 527 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 MYCBPQ99417 103 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 LGALS16A8MUM7 142 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 HMGB1P1B2RPK0 211 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 PLEKHA8P1O95397 391 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 TMED8Q6PL24 325 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 ANO9A1A5B4 782 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 KIF3CO14782 793 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 NR1D1P20393 614 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 PPM1FP49593 454 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 RNASELQ05823 741 aaKnown RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 NSMCE1Q8WV22 266 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 ZNF577Q9BSK1 485 aa17.24■□□□□ 0.35
SHTN1-201ENST00000260777 ACTR5Q9H9F9 607 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-201ENST00000260777 PLA2G4BP0C869 781 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 CAPN12Q6ZSI9 719 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 USH1CQ9Y6N9 552 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 RNF8O76064 485 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 MAPK4P31152 587 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 SH3BGRP55822 239 aaPredicted RBP17.23■□□□□ 0.35
SHTN1-201ENST00000260777 CUL4BQ13620 913 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 DOK7Q18PE1 504 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 ANKRD35Q8N283 1001 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 NEDD4P46934 1319 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 ARHGAP42A6NI28 874 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 CA8P35219 290 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 IFNAR2P48551 515 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 YARSP54577 528 aaKnown RBP17.23■□□□□ 0.35
SHTN1-201ENST00000260777 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
SHTN1-201ENST00000260777 PROCA1Q8NCQ7 364 aaPredicted RBP17.23■□□□□ 0.35
SHTN1-201ENST00000260777 GFPT2O94808 682 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 SGO2Q562F6 1265 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 SCYL2Q6P3W7 929 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 ARHGEF18Q6ZSZ5 1173 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 HAUS2Q9NVX0 235 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 ARAP3Q8WWN8 1544 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
SHTN1-201ENST00000260777 MECOMQ03112 1051 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 CDC37Q16543 378 aaPredicted RBP17.23■□□□□ 0.35
SHTN1-201ENST00000260777 KCTD1Q719H9 257 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 COA7Q96BR5 231 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 MLXIPQ9HAP2 919 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 GJB4Q9NTQ9 266 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
SHTN1-201ENST00000260777 CYP2D7A0A087X1C5 515 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 CTNND1O60716 968 aaKnown RBP17.22■□□□□ 0.35
SHTN1-201ENST00000260777 TMEM191BP0C7N4 346 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 MAP7Q14244 749 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 BSPRYQ5W0U4 402 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 KAZNQ674X7 775 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 CYB5R4Q7L1T6 521 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 TRIM50Q86XT4 487 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 SERPINB13Q9UIV8 391 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 POLGP54098 1239 aaPredicted RBP17.22■□□□□ 0.35
SHTN1-201ENST00000260777 NEK9Q8TD19 979 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 QRICH2Q9H0J4 1663 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 SETBP1Q9Y6X0 1596 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 TCP10L2B9ZVM9 353 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 PSMD6Q15008 389 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 RINT1Q6NUQ1 792 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 UNC13DQ70J99 1090 aa17.22■□□□□ 0.35
SHTN1-201ENST00000260777 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
SHTN1-201ENST00000260777 CCDC188H7C350 402 aa17.21■□□□□ 0.35
SHTN1-201ENST00000260777 HNRNPDLO14979 420 aaKnown RBP17.21■□□□□ 0.35
SHTN1-201ENST00000260777 CLIC2O15247 247 aa17.21■□□□□ 0.35
SHTN1-201ENST00000260777 TRIM68Q6AZZ1 485 aa17.21■□□□□ 0.35
SHTN1-201ENST00000260777 PDZD4Q76G19 769 aaPredicted RBP17.21■□□□□ 0.35
SHTN1-201ENST00000260777 NRBP2Q9NSY0 501 aa17.21■□□□□ 0.35
SHTN1-201ENST00000260777 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.21■□□□□ 0.35
SHTN1-201ENST00000260777 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
SHTN1-201ENST00000260777 PPP2R5AQ15172 486 aa17.21■□□□□ 0.35
SHTN1-201ENST00000260777 PFKFB3Q16875 520 aaPredicted RBP17.21■□□□□ 0.35
SHTN1-201ENST00000260777 MAP7D3Q8IWC1 876 aa17.21■□□□□ 0.35
SHTN1-201ENST00000260777 FLAD1Q8NFF5 587 aa17.21■□□□□ 0.35
SHTN1-201ENST00000260777 USP21Q9UK80 565 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms