RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CDK17Q00537 523 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 TBC1D8BQ0IIM8 1120 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 SEMA3FQ13275 785 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 HAUS3Q68CZ6 603 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 PRPF38AQ8NAV1 312 aaKnown RBP20.94■□□□□ 0.94
SNX4-201ENST00000251775 ATXN2Q99700 1313 aaKnown RBP20.94■□□□□ 0.94
SNX4-201ENST00000251775 EDIL3O43854 480 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 PLEKP08567 350 aaPredicted RBP20.94■□□□□ 0.94
SNX4-201ENST00000251775 MATR3P43243 847 aaKnown RBP eCLIP20.94■□□□□ 0.94
SNX4-201ENST00000251775 PDE4DQ08499 809 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 STK4Q13043 487 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 SF3B2Q13435 895 aaKnown RBP20.94■□□□□ 0.94
SNX4-201ENST00000251775 CCDC96Q2M329 555 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 CERS5Q8N5B7 392 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 EEF2KMTQ96G04 330 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 DHTKD1Q96HY7 919 aaPredicted RBP20.94■□□□□ 0.94
SNX4-201ENST00000251775 OSBPL9Q96SU4 736 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 C7orf25Q9BPX7 421 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 MLXIPQ9HAP2 919 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 SMARCAL1Q9NZC9 954 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 NDUFAB1O14561 156 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 PPEF1O14829 653 aaPredicted RBP20.93■□□□□ 0.94
SNX4-201ENST00000251775 TACC1O75410 805 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 FNTAP49354 379 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 DPP8Q6V1X1 898 aaPredicted RBP20.93■□□□□ 0.94
SNX4-201ENST00000251775 SP8Q8IXZ3 490 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 CAVIN3Q969G5 261 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 SH2D4AQ9H788 454 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 STIM2Q9P246 746 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 ANKRD31Q8N7Z5 1873 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 IGKV6D-41A0A0C4DH26 115 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 TXKP42681 527 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 ASIC1P78348 528 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 NFRKBQ6P4R8 1299 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 SH2D3CQ8N5H7 860 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 NOC3LQ8WTT2 800 aaKnown RBP20.93■□□□□ 0.94
SNX4-201ENST00000251775 MXD3Q9BW11 206 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 GPCPD1Q9NPB8 672 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 CAPN7Q9Y6W3 813 aa20.93■□□□□ 0.94
SNX4-201ENST00000251775 HSF2BPO75031 334 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 FCER1AP12319 257 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 USP8P40818 1118 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 SPA17Q15506 151 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 B4GALNT4Q76KP1 1039 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 CSGALNACT2Q8N6G5 542 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 P2RX5Q93086 422 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 CCDC42Q96M95 316 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 ZIM3Q96PE6 472 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 MTMR9Q96QG7 549 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 RUFY1Q96T51 708 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 EHD2Q9NZN4 543 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 ADAMTSL1Q8N6G6 1762 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 A6NNZ2 444 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 MOCS3O95396 460 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 SNHG28P0DPA3 235 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 TNFRSF8P28908 595 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 TUBB8Q3ZCM7 444 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 ASPRV1Q53RT3 343 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 ANKRD40Q6AI12 368 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 PCMTD1Q96MG8 357 aaPredicted RBP20.92■□□□□ 0.94
SNX4-201ENST00000251775 COA1Q9GZY4 146 aa20.92■□□□□ 0.94
SNX4-201ENST00000251775 CCNE1P24864 410 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 CXCR5P32302 372 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 PSMB7Q99436 277 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 MYH10P35580 1976 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 A0A1W2PQJ5 194 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 hCG_1984214I3L0E3 225 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 SLC37A4O43826 429 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 USO1O60763 962 aaKnown RBP20.91■□□□□ 0.94
SNX4-201ENST00000251775 TDP2O95551 362 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 ATP1A2P50993 1020 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 ADCY7P51828 1080 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 GRB10Q13322 594 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 ORC2Q13416 577 aaPredicted RBP20.91■□□□□ 0.94
SNX4-201ENST00000251775 FIGNQ5HY92 759 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 MIIPQ5JXC2 388 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 SLC27A3Q5K4L6 730 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 ZNF713Q8N859 430 aaPredicted RBP20.91■□□□□ 0.94
SNX4-201ENST00000251775 HPS3Q969F9 1004 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 CNOT6LQ96LI5 555 aaKnown RBP20.91■□□□□ 0.94
SNX4-201ENST00000251775 IFIH1Q9BYX4 1025 aaKnown RBP20.91■□□□□ 0.94
SNX4-201ENST00000251775 HYOU1Q9Y4L1 999 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 PCDHA13Q9Y5I0 950 aa20.91■□□□□ 0.94
SNX4-201ENST00000251775 QSER1Q2KHR3 1735 aa20.9■□□□□ 0.94
SNX4-201ENST00000251775 NKRFO15226 690 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNX4-201ENST00000251775 TCP1P17987 556 aaKnown RBP20.9■□□□□ 0.94
SNX4-201ENST00000251775 KCTD16Q68DU8 428 aa20.9■□□□□ 0.94
SNX4-201ENST00000251775 CCDC47Q96A33 483 aaKnown RBP20.9■□□□□ 0.94
SNX4-201ENST00000251775 ARHGAP20Q9P2F6 1191 aa20.9■□□□□ 0.94
SNX4-201ENST00000251775 ATP6V0A2Q9Y487 856 aa20.9■□□□□ 0.94
SNX4-201ENST00000251775 KRT14P02533 472 aa20.89■□□□□ 0.94
SNX4-201ENST00000251775 CALCRLQ16602 461 aa20.89■□□□□ 0.94
SNX4-201ENST00000251775 CALML4Q96GE6 196 aa20.89■□□□□ 0.94
SNX4-201ENST00000251775 PNMA5Q96PV4 448 aa20.89■□□□□ 0.94
SNX4-201ENST00000251775 ERGIC2Q96RQ1 377 aa20.89■□□□□ 0.94
SNX4-201ENST00000251775 BLOC1S4Q9NUP1 217 aa20.89■□□□□ 0.94
SNX4-201ENST00000251775 MYO1FO00160 1098 aa20.89■□□□□ 0.93
SNX4-201ENST00000251775 MEFVO15553 781 aaPredicted RBP20.89■□□□□ 0.93
SNX4-201ENST00000251775 FSBPO95073 299 aa20.89■□□□□ 0.93
SNX4-201ENST00000251775 NNTQ13423 1086 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms