RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C EXO70P19658 623 aa6.21□□□□□ -1.42
ATG17YLR423C YCP4P25349 247 aaKnown RBP6.21□□□□□ -1.42
ATG17YLR423C RRP7P25368 297 aaPredicted RBP6.21□□□□□ -1.42
ATG17YLR423C SPC34P36131 295 aa6.21□□□□□ -1.42
ATG17YLR423C YMR147WP40218 223 aaKnown RBP6.21□□□□□ -1.42
ATG17YLR423C CSM2P40465 213 aa6.21□□□□□ -1.42
ATG17YLR423C AZF1P41696 914 aa6.21□□□□□ -1.42
ATG17YLR423C YJL132WP47014 750 aa6.21□□□□□ -1.42
ATG17YLR423C RPT4P53549 437 aaKnown RBP6.21□□□□□ -1.42
ATG17YLR423C YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
ATG17YLR423C THI20Q08224 551 aa6.21□□□□□ -1.42
ATG17YLR423C DSE3Q08729 430 aa6.21□□□□□ -1.42
ATG17YLR423C YLR278CQ05854 1341 aa6.21□□□□□ -1.42
ATG17YLR423C RHB1P25378 209 aa6.2□□□□□ -1.42
ATG17YLR423C KRE2P27809 442 aa6.2□□□□□ -1.42
ATG17YLR423C ECM15P35195 104 aa6.2□□□□□ -1.42
ATG17YLR423C SEC5P89102 971 aa6.2□□□□□ -1.42
ATG17YLR423C YMR254CQ04838 102 aa6.2□□□□□ -1.42
ATG17YLR423C PUP2P32379 260 aa6.19□□□□□ -1.42
ATG17YLR423C ERG1P32476 496 aaKnown RBP6.19□□□□□ -1.42
ATG17YLR423C PRP21P32524 280 aaPredicted RBP6.19□□□□□ -1.42
ATG17YLR423C SER3P40054 469 aa6.19□□□□□ -1.42
ATG17YLR423C SCW4P53334 386 aaKnown RBP6.19□□□□□ -1.42
ATG17YLR423C HSP31Q04432 237 aa6.19□□□□□ -1.42
ATG17YLR423C YEH2Q07950 538 aa6.19□□□□□ -1.42
ATG17YLR423C MTR10Q99189 972 aa6.19□□□□□ -1.42
ATG17YLR423C TY1B-AO13527 1196 aaKnown RBP6.18□□□□□ -1.42
ATG17YLR423C CAR1P00812 333 aaKnown RBP6.18□□□□□ -1.42
ATG17YLR423C LPD1P09624 499 aaKnown RBP6.18□□□□□ -1.42
ATG17YLR423C RAD24P32641 659 aa6.18□□□□□ -1.42
ATG17YLR423C FRE1P32791 686 aa6.18□□□□□ -1.42
ATG17YLR423C TRS65P32893 560 aa6.18□□□□□ -1.42
ATG17YLR423C ASK1P35734 292 aa6.18□□□□□ -1.42
ATG17YLR423C YIF1P53845 314 aaKnown RBP6.18□□□□□ -1.42
ATG17YLR423C EOS1P53938 366 aa6.18□□□□□ -1.42
ATG17YLR423C OCA2P53949 197 aa6.18□□□□□ -1.42
ATG17YLR423C KTR5P53966 522 aaPredicted RBP6.18□□□□□ -1.42
ATG17YLR423C YMR034CQ05131 434 aaPredicted RBP6.18□□□□□ -1.42
ATG17YLR423C MLH2Q07980 695 aa6.18□□□□□ -1.42
ATG17YLR423C UAF30Q08747 228 aa6.18□□□□□ -1.42
ATG17YLR423C PDE2P06776 526 aa6.17□□□□□ -1.42
ATG17YLR423C RPI1P23250 407 aaKnown RBP6.17□□□□□ -1.42
ATG17YLR423C PPZ1P26570 692 aa6.17□□□□□ -1.42
ATG17YLR423C SIN4P32259 974 aa6.17□□□□□ -1.42
ATG17YLR423C RPN2P32565 945 aaKnown RBP6.17□□□□□ -1.42
ATG17YLR423C SWH1P35845 1188 aa6.17□□□□□ -1.42
ATG17YLR423C RSM22P36056 628 aa6.17□□□□□ -1.42
ATG17YLR423C CAJ1P39101 391 aa6.17□□□□□ -1.42
ATG17YLR423C YER130CP39959 443 aa6.17□□□□□ -1.42
ATG17YLR423C FAU1P40099 211 aa6.17□□□□□ -1.42
ATG17YLR423C YTA12P40341 825 aa6.17□□□□□ -1.42
ATG17YLR423C ATP22P50273 684 aaPredicted RBP6.17□□□□□ -1.42
ATG17YLR423C YGR016WP53209 190 aa6.17□□□□□ -1.42
ATG17YLR423C SMF3Q12078 473 aaPredicted RBP6.17□□□□□ -1.42
ATG17YLR423C CSR2Q12734 1121 aa6.17□□□□□ -1.42
ATG17YLR423C APE2P32454 952 aaKnown RBP6.16□□□□□ -1.42
ATG17YLR423C ZTA1P38230 334 aaKnown RBP6.16□□□□□ -1.42
ATG17YLR423C ELP2P42935 788 aa6.16□□□□□ -1.42
ATG17YLR423C YDR387CQ04162 555 aa6.16□□□□□ -1.42
ATG17YLR423C MRPL51Q06090 140 aaPredicted RBP6.16□□□□□ -1.42
ATG17YLR423C RKM5Q12367 367 aa6.16□□□□□ -1.42
ATG17YLR423C RRD2Q12461 358 aa6.16□□□□□ -1.42
ATG17YLR423C FRE6Q12473 712 aa6.16□□□□□ -1.42
ATG17YLR423C RPL1AP0CX43 217 aaKnown RBP6.15□□□□□ -1.42
ATG17YLR423C RPL1BP0CX44 217 aaKnown RBP6.15□□□□□ -1.42
ATG17YLR423C BUB3P26449 341 aa6.15□□□□□ -1.42
ATG17YLR423C EFM2P38347 419 aa6.15□□□□□ -1.42
ATG17YLR423C FAD1P38913 306 aa6.15□□□□□ -1.42
ATG17YLR423C YIR014WP40570 242 aa6.15□□□□□ -1.42
ATG17YLR423C IRC15Q02733 499 aa6.15□□□□□ -1.42
ATG17YLR423C DIG1Q03063 452 aaKnown RBP6.15□□□□□ -1.42
ATG17YLR423C RBA50Q04418 439 aa6.15□□□□□ -1.42
ATG17YLR423C SNA4Q07549 140 aa6.15□□□□□ -1.42
ATG17YLR423C KEL3Q08979 651 aaPredicted RBP6.15□□□□□ -1.42
ATG17YLR423C HEL1P36113 551 aa6.14□□□□□ -1.43
ATG17YLR423C CCT2P39076 527 aaKnown RBP6.14□□□□□ -1.43
ATG17YLR423C VPS52P39904 641 aa6.14□□□□□ -1.43
ATG17YLR423C VHS2P40463 436 aa6.14□□□□□ -1.43
ATG17YLR423C SAS2P40963 338 aa6.14□□□□□ -1.43
ATG17YLR423C YJR011CP47086 261 aaPredicted RBP6.14□□□□□ -1.43
ATG17YLR423C ECM27P47144 725 aa6.14□□□□□ -1.43
ATG17YLR423C BTN2P53286 410 aa6.14□□□□□ -1.43
ATG17YLR423C RHO5P53879 331 aaKnown RBP6.14□□□□□ -1.43
ATG17YLR423C YMR087WQ04299 284 aa6.14□□□□□ -1.43
ATG17YLR423C YLR281CQ05863 155 aa6.14□□□□□ -1.43
ATG17YLR423C VPS74Q06385 345 aa6.14□□□□□ -1.43
ATG17YLR423C RKM1Q08961 583 aaPredicted RBP6.14□□□□□ -1.43
ATG17YLR423C YML002WP0CF17 737 aa6.13□□□□□ -1.43
ATG17YLR423C GLN3P18494 730 aa6.13□□□□□ -1.43
ATG17YLR423C ATO2P32907 282 aa6.13□□□□□ -1.43
ATG17YLR423C RRN10P38204 145 aa6.13□□□□□ -1.43
ATG17YLR423C WSS1P38838 269 aa6.13□□□□□ -1.43
ATG17YLR423C ISC1P40015 477 aaKnown RBP6.13□□□□□ -1.43
ATG17YLR423C GUF1P46943 645 aa6.13□□□□□ -1.43
ATG17YLR423C PCP1P53259 346 aa6.13□□□□□ -1.43
ATG17YLR423C SYO1Q07395 620 aa6.13□□□□□ -1.43
ATG17YLR423C YDL009CQ12210 107 aa6.13□□□□□ -1.43
ATG17YLR423C YPT1P01123 206 aaKnown RBP6.12□□□□□ -1.43
ATG17YLR423C SCEIP03882 235 aa6.12□□□□□ -1.43
ATG17YLR423C RPL6BP05739 176 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 156 ms