RNA–Protein interactions for RNA: YGL251C

HFM1, Transcript of Meiosis specific DNA helicase, yeast

Gene HFM1, Length 3,564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFM1	YGL251C	YOR389W	Q08912	624 aa		3.01	□□□□□ -1.93
HFM1	YGL251C	CDC21	P06785	304 aa		3	□□□□□ -1.93
HFM1	YGL251C	KRS1	P15180	591 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	ATP10	P18496	279 aa		3	□□□□□ -1.93
HFM1	YGL251C	RRP1	P35178	278 aa	Predicted RBP	3	□□□□□ -1.93
HFM1	YGL251C	QDR3	P38227	689 aa		3	□□□□□ -1.93
HFM1	YGL251C	YHR045W	P38775	560 aa		3	□□□□□ -1.93
HFM1	YGL251C	YHR210C	P38893	341 aa		3	□□□□□ -1.93
HFM1	YGL251C	EMC2	P47133	292 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	YGR127W	P53275	312 aa		3	□□□□□ -1.93
HFM1	YGL251C	THP1	Q08231	455 aa		3	□□□□□ -1.93
HFM1	YGL251C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
HFM1	YGL251C	SPS4	P09937	338 aa		3	□□□□□ -1.93
HFM1	YGL251C	ABF1	P14164	731 aa		3	□□□□□ -1.93
HFM1	YGL251C	SGV1	P23293	657 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	PMI40	P29952	429 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	ECM25	P32525	599 aa		3	□□□□□ -1.93
HFM1	YGL251C	PRS1	P32895	427 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	CIN4	P39110	191 aa		3	□□□□□ -1.93
HFM1	YGL251C	YMR147W	P40218	223 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	LIA1	P47120	325 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	PHB2	P50085	310 aa		3	□□□□□ -1.93
HFM1	YGL251C	RIM8	P53179	542 aa		3	□□□□□ -1.93
HFM1	YGL251C	COP1	P53622	1201 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	NBL1	Q3E7Y6	73 aa		3	□□□□□ -1.93
HFM1	YGL251C	RPP2A	P05319	106 aa	Known RBP	3	□□□□□ -1.93
HFM1	YGL251C	YMR085W	P0CF18	432 aa		3	□□□□□ -1.93
HFM1	YGL251C	UGA1	P17649	471 aa		3	□□□□□ -1.93
HFM1	YGL251C	HXT2	P23585	541 aa		3	□□□□□ -1.93
HFM1	YGL251C	RTT102	P53330	157 aa		3	□□□□□ -1.93
HFM1	YGL251C	IST1	P53843	298 aa	Predicted RBP	3	□□□□□ -1.93
HFM1	YGL251C	CHO2	P05374	869 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	SIR3	P06701	978 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	TKL1	P23254	680 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	RDS1	P25611	832 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	YPS1	P32329	569 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	UIP3	P39547	235 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	DSE1	P40077	573 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	YFL015C	P43578	164 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	DRN1	P53255	507 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	ZPR1	P53303	486 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	ATG38	Q05789	226 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	TGS1	Q12052	315 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	YIL002W-A	Q3E7Z5	69 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	YPT1	P01123	206 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	RPS13	P05756	151 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	PEP4	P07267	405 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	SAM1	P10659	382 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	PRP6	P19735	899 aa	Predicted RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	SPE2	P21182	396 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	PSO2	P30620	661 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	IMP3	P32899	183 aa	Predicted RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	BUD2	P33314	1104 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	KAP104	P38217	918 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	AIM3	P38266	947 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	POP1	P41812	875 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	TOS3	P43637	560 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	SNG1	P46950	547 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	URB2	P47108	1174 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	YNL050C	P53952	270 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	SLG1	P54867	378 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	YDR132C	Q03900	495 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	RAP1	P11938	827 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	DEG1	P31115	442 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
HFM1	YGL251C	PHO23	P50947	330 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	TIM21	P53220	239 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	YIF1	P53845	314 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	YNL146W	P53906	100 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	YMR178W	Q03219	274 aa	Known RBP	2.99	□□□□□ -1.93
HFM1	YGL251C	BSC6	Q08280	497 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	PEX27	Q08580	376 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	ADF1	Q2V2Q1	113 aa		2.99	□□□□□ -1.93
HFM1	YGL251C	QCR6	P00127	147 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	CDC36	P06100	191 aa	Predicted RBP	2.98	□□□□□ -1.93
HFM1	YGL251C	TRP4	P07285	380 aa	Predicted RBP	2.98	□□□□□ -1.93
HFM1	YGL251C	PTC6	P25646	442 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	NDI1	P32340	513 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
HFM1	YGL251C	PCL5	P38794	229 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	RIX1	P38883	763 aa	Predicted RBP	2.98	□□□□□ -1.93
HFM1	YGL251C	SPT8	P38915	602 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	BIO3	P50277	480 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	ERG26	P53199	349 aa	Known RBP	2.98	□□□□□ -1.93
HFM1	YGL251C	RAD52	P06778	471 aa	Known RBP	2.98	□□□□□ -1.93
HFM1	YGL251C	GID7	P25569	745 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	YCL068C	P25593	260 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	TCM62	P38228	572 aa	Known RBP	2.98	□□□□□ -1.93
HFM1	YGL251C	UBA4	P38820	440 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	ERV46	P39727	415 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	FMP52	P40008	231 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	SYG1	P40528	902 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	ASN2	P49090	572 aa	Known RBP	2.98	□□□□□ -1.93
HFM1	YGL251C	IPK1	Q06667	281 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	VAC14	Q06708	880 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	POS5	Q06892	414 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	FMP16	Q12497	93 aa		2.98	□□□□□ -1.93
HFM1	YGL251C	TRM2	P33753	639 aa		2.97	□□□□□ -1.93
HFM1	YGL251C	PIM1	P36775	1133 aa		2.97	□□□□□ -1.93
HFM1	YGL251C	FET3	P38993	636 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms