RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 IGDCC4Q8TDY8 1250 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 VWCEQ96DN2 955 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 PDCD2LQ9BRP1 358 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 ZNF576Q9H609 170 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 DDX41Q9UJV9 622 aaKnown RBP23.3■■□□□ 1.32
CLN6-222ENST00000637667 MYO9BQ13459 2157 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.29■■□□□ 1.32
CLN6-222ENST00000637667 MRVI1Q9Y6F6 885 aa23.29■■□□□ 1.32
CLN6-222ENST00000637667 PNMA6FA0A0J9YX94 578 aa23.28■■□□□ 1.32
CLN6-222ENST00000637667 GCOM1H8Y6P7 765 aaPredicted RBP23.28■■□□□ 1.32
CLN6-222ENST00000637667 POLR2MP0CAP2 368 aa23.28■■□□□ 1.32
CLN6-222ENST00000637667 MYCLP12524 364 aaPredicted RBP23.28■■□□□ 1.32
CLN6-222ENST00000637667 CHMP4BP1P59074 171 aa23.28■■□□□ 1.32
CLN6-222ENST00000637667 EMID1Q96A84 441 aaPredicted RBP23.28■■□□□ 1.32
CLN6-222ENST00000637667 PFKMP08237 780 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 CASTP20810 708 aaKnown RBP23.27■■□□□ 1.32
CLN6-222ENST00000637667 RAB30Q15771 203 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 DGKDQ16760 1214 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 VSIG10LQ86VR7 867 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 IL31RAQ8NI17 732 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 KAT2BQ92831 832 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 LSG1Q9H089 658 aaKnown RBP23.27■■□□□ 1.32
CLN6-222ENST00000637667 LY9Q9HBG7 655 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 MSRAQ9UJ68 235 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 NOD1Q9Y239 953 aa23.27■■□□□ 1.32
CLN6-222ENST00000637667 PITPNM1O00562 1244 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 RGS20O76081 388 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 LAMC2Q13753 1193 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 PGM5Q15124 567 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 CASC1Q6TDU7 716 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 RETREG2Q8NC44 543 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 MAP3K14Q99558 947 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 ESYT1Q9BSJ8 1104 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 MTA3Q9BTC8 594 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 SLC4A7Q9Y6M7 1214 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 CDH23Q9H251 3354 aa23.26■■□□□ 1.31
CLN6-222ENST00000637667 PRC1O43663 620 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 DDAH1O94760 285 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 BFSP2Q13515 415 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 PTGISQ16647 500 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 KCNV1Q6PIU1 500 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 DEFB128Q7Z7B8 93 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 SESTD1Q86VW0 696 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 FCHSD1Q86WN1 690 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 DHX37Q8IY37 1157 aaKnown RBP23.25■■□□□ 1.31
CLN6-222ENST00000637667 ZNF654Q8IZM8 581 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 PPTC7Q8NI37 304 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 PIBF1Q8WXW3 757 aa23.25■■□□□ 1.31
CLN6-222ENST00000637667 ZBBXA8MT70 800 aa23.24■■□□□ 1.31
CLN6-222ENST00000637667 CCND2P30279 289 aa23.24■■□□□ 1.31
CLN6-222ENST00000637667 KIF5BP33176 963 aa23.24■■□□□ 1.31
CLN6-222ENST00000637667 RFC2P35250 354 aa23.24■■□□□ 1.31
CLN6-222ENST00000637667 CTCFLQ8NI51 663 aaPredicted RBP23.24■■□□□ 1.31
CLN6-222ENST00000637667 MYL10Q9BUA6 226 aa23.24■■□□□ 1.31
CLN6-222ENST00000637667 SPZ1Q9BXG8 430 aa23.24■■□□□ 1.31
CLN6-222ENST00000637667 KIAA1217Q5T5P2 1943 aa23.23■■□□□ 1.31
CLN6-222ENST00000637667 SLC27A2O14975 620 aa23.23■■□□□ 1.31
CLN6-222ENST00000637667 IQCF3P0C7M6 154 aa23.23■■□□□ 1.31
CLN6-222ENST00000637667 MCM5P33992 734 aa23.23■■□□□ 1.31
CLN6-222ENST00000637667 GDF6Q6KF10 455 aaPredicted RBP23.23■■□□□ 1.31
CLN6-222ENST00000637667 CTAGE1Q96RT6 745 aa23.23■■□□□ 1.31
CLN6-222ENST00000637667 NKX2-4Q9H2Z4 354 aa23.23■■□□□ 1.31
CLN6-222ENST00000637667 UNC80Q8N2C7 3258 aa23.23■■□□□ 1.31
CLN6-222ENST00000637667 SH2B2O14492 632 aaPredicted RBP23.22■■□□□ 1.31
CLN6-222ENST00000637667 F2P00734 622 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 TGFB3P10600 412 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 HOXD8P13378 290 aaPredicted RBP23.22■■□□□ 1.31
CLN6-222ENST00000637667 PSEN2P49810 448 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 CELF3Q5SZQ8 465 aaKnown RBP23.22■■□□□ 1.31
CLN6-222ENST00000637667 MYSM1Q5VVJ2 828 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 CREB3L3Q68CJ9 461 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 NFXL1Q6ZNB6 911 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 TMTC2Q8N394 836 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 RRP36Q96EU6 259 aaKnown RBP23.22■■□□□ 1.31
CLN6-222ENST00000637667 TMEM87BQ96K49 555 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 KATNAL1Q9BW62 490 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 YBX2Q9Y2T7 364 aaKnown RBP23.22■■□□□ 1.31
CLN6-222ENST00000637667 CHD9Q3L8U1 2897 aa23.22■■□□□ 1.31
CLN6-222ENST00000637667 TTC28Q96AY4 2481 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 GGPS1O95749 300 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 ZNF286BP0CG31 522 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 ACTN1P12814 892 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 ATP2A2P16615 1042 aaKnown RBP23.21■■□□□ 1.31
CLN6-222ENST00000637667 UBA1P22314 1058 aaKnown RBP23.21■■□□□ 1.31
CLN6-222ENST00000637667 SMARCA1P28370 1054 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 RABGGTBP53611 331 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 COL9A3Q14050 684 aaPredicted RBP23.21■■□□□ 1.31
CLN6-222ENST00000637667 MFSD10Q14728 455 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 CCDC155Q8N6L0 562 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 C7orf31Q8N865 590 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 CAGE1Q8TC20 777 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 ZFP91Q96JP5 570 aaPredicted RBP23.21■■□□□ 1.31
CLN6-222ENST00000637667 SPATA33Q96N06 139 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 LZTS2Q9BRK4 669 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 ALG1Q9BT22 464 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 ANO2Q9NQ90 1003 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 HDAC6Q9UBN7 1215 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 GTF2IRD1Q9UHL9 959 aa23.21■■□□□ 1.31
CLN6-222ENST00000637667 FRMPD4Q14CM0 1322 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 CCDC69A6NI79 296 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms