RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PI4KBQ9UBF8 816 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 PTPN22Q9Y2R2 807 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 KBTBD13C9JR72 458 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 PDE1BQ01064 536 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 DYRK4Q9NR20 520 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 NFKBIAP25963 317 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 PMLP29590 882 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 RC3H1Q5TC82 1133 aaKnown RBP17.5■□□□□ 0.39
CLN5-208ENST00000636183 PDZD8Q8NEN9 1154 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 EXT2Q93063 718 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 KANSL2Q9H9L4 492 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
CLN5-208ENST00000636183 ADORA1P30542 326 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 ARMCX2Q7L311 632 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 BABAM1Q9NWV8 329 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 MGEA5O60502 916 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
CLN5-208ENST00000636183 GBP1P32455 592 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 ASPRV1Q53RT3 343 aa17.5■□□□□ 0.39
CLN5-208ENST00000636183 HNRNPCL2B2RXH8 293 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
CLN5-208ENST00000636183 CLIC2O15247 247 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 HNRNPCL1O60812 293 aaKnown RBP17.49■□□□□ 0.39
CLN5-208ENST00000636183 FAM71BQ8TC56 605 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 PRIMPOLQ96LW4 560 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 SUCLA2Q9P2R7 463 aaPredicted RBP17.49■□□□□ 0.39
CLN5-208ENST00000636183 GUCY2FP51841 1108 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 ARHGAP4P98171 946 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 RNF207Q6ZRF8 634 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 TEX2Q8IWB9 1127 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 ACCSQ96QU6 501 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 COBLO75128 1261 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 PDE1CQ14123 709 aaPredicted RBP17.49■□□□□ 0.39
CLN5-208ENST00000636183 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 RASGRP4Q8TDF6 673 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 KCNJ18B7U540 433 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 KCNJ12Q14500 433 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 HAUS8Q9BT25 410 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 TRPC7Q9HCX4 862 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 FARP1Q9Y4F1 1045 aaPredicted RBP17.49■□□□□ 0.39
CLN5-208ENST00000636183 KRIT1O00522 736 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 GPC4O75487 556 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 MORC3Q14149 939 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 GPATCH4Q5T3I0 446 aaKnown RBP17.49■□□□□ 0.39
CLN5-208ENST00000636183 RAB17Q9H0T7 212 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 FAM114A2Q9NRY5 505 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
CLN5-208ENST00000636183 CLCA2Q9UQC9 943 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 TUBB4BP68371 445 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 IFNLR1Q8IU57 520 aaPredicted RBP17.49■□□□□ 0.39
CLN5-208ENST00000636183 EEF2KMTQ96G04 330 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 DSCC1Q9BVC3 393 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 SERPINB13Q9UIV8 391 aa17.49■□□□□ 0.39
CLN5-208ENST00000636183 STX2P32856 288 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 MESDQ14696 234 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 ZNF668Q96K58 619 aaPredicted RBP17.48■□□□□ 0.39
CLN5-208ENST00000636183 MMP19Q99542 508 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 CDO1Q16878 200 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 KDM2BQ8NHM5 1336 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 NSUN2Q08J23 767 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLN5-208ENST00000636183 ARHGAP24Q8N264 748 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 ARHGEF1Q92888 912 aaKnown RBP17.48■□□□□ 0.39
CLN5-208ENST00000636183 DDX27Q96GQ7 796 aaKnown RBP17.48■□□□□ 0.39
CLN5-208ENST00000636183 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 PUS3Q9BZE2 481 aaKnown RBP17.48■□□□□ 0.39
CLN5-208ENST00000636183 DPH5Q9H2P9 285 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 ATF2P15336 505 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 ZBTB41Q5SVQ8 909 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 SDCCAG3Q96C92 435 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 GDAQ9Y2T3 454 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 F8W8V4 182 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 NAA35Q5VZE5 725 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 KCTD6Q8NC69 237 aa17.48■□□□□ 0.39
CLN5-208ENST00000636183 RRP9O43818 475 aaKnown RBP17.47■□□□□ 0.39
CLN5-208ENST00000636183 SMIM24O75264 130 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 DDAH1O94760 285 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 MYL1P05976 194 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 SH3KBP1Q96B97 665 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
CLN5-208ENST00000636183 MED7O43513 233 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 TROVE2P10155 538 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLN5-208ENST00000636183 DDIT3P35638 169 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 SPDL1Q96EA4 605 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 PIGSQ96S52 555 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 PTK2BQ14289 1009 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 RAVER2Q9HCJ3 691 aaKnown RBP17.47■□□□□ 0.39
CLN5-208ENST00000636183 GNGT2O14610 69 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 GSTA4O15217 222 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 UBE2SQ16763 222 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
CLN5-208ENST00000636183 TUBB4AP04350 444 aa17.46■□□□□ 0.39
CLN5-208ENST00000636183 MYBP10242 640 aa17.46■□□□□ 0.39
CLN5-208ENST00000636183 CPB1P15086 417 aa17.46■□□□□ 0.39
CLN5-208ENST00000636183 ATP5JP18859 108 aa17.46■□□□□ 0.39
CLN5-208ENST00000636183 HABP4Q5JVS0 413 aaKnown RBP17.46■□□□□ 0.39
CLN5-208ENST00000636183 NUDT18Q6ZVK8 323 aa17.46■□□□□ 0.39
CLN5-208ENST00000636183 COG4Q9H9E3 785 aa17.46■□□□□ 0.39
CLN5-208ENST00000636183 HPCAL4Q9UM19 191 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms