RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 TPBGLP0DKB5 382 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 UBXN1Q04323 297 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 MEA1Q16626 185 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.39□□□□□ -0.91
SRSF3-207ENST00000620389 SMYD4Q8IYR2 804 aaPredicted RBP9.39□□□□□ -0.91
SRSF3-207ENST00000620389 LRRC34Q8IZ02 419 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 SLC17A8Q8NDX2 589 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 STK32AQ8WU08 396 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 NCSTNQ92542 709 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
SRSF3-207ENST00000620389 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.39□□□□□ -0.913e-8■■■□□ 15.7
SRSF3-207ENST00000620389 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
SRSF3-207ENST00000620389 MYH7P12883 1935 aa9.39□□□□□ -0.91
SRSF3-207ENST00000620389 F8VZ95 297 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 SH2B2O14492 632 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CHGBP05060 677 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 PHEXP78562 749 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 HLTFQ14527 1009 aaKnown RBP eCLIP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 WASHC4Q2M389 1173 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CFAP221Q4G0U5 840 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CCDC92Q53HC0 331 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 RASIP1Q5U651 963 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 SLF2Q8IX21 1173 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 GBP5Q96PP8 586 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 ESF1Q9H501 851 aaKnown RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 NHEJ1Q9H9Q4 299 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 SLC4A7Q9Y6M7 1214 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 MYH13Q9UKX3 1938 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 N4BP2Q86UW6 1770 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CPLX1O14810 134 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CETN3O15182 167 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 PTDSS1P48651 473 aaKnown RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 PLOD1Q02809 727 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CNPY1Q3B7I2 92 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 SH2D4BQ5SQS7 431 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 GIGYF2Q6Y7W6 1299 aaKnown RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 NCCRP1Q6ZVX7 275 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 TMEM110Q86TL2 294 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 RAB11FIP4Q86YS3 637 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 KLHDC4Q8TBB5 520 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 ASAP3Q8TDY4 903 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 SPIRE2Q8WWL2 714 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 MS4A14Q96JA4 679 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 RMND1Q9NWS8 449 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CTTNBP2NLQ9P2B4 639 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 LRWD1Q9UFC0 647 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 TRIM33Q9UPN9 1127 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 LRCH1Q9Y2L9 728 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 E7EWF7 191 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 SART1O43290 800 aaKnown RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 COBLO75128 1261 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 PEX11AO75192 247 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CAPN15O75808 1086 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CHN1P15882 459 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CACNA2D1P54289 1103 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 GRIN1Q05586 938 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 SPAG1Q07617 926 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 MUM1Q2TAK8 710 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 KRT71Q3SY84 523 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 ARHGAP18Q8N392 663 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 RBBP8NLQ8NC74 664 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 HIC2Q96JB3 615 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 HAPLN3Q96S86 360 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 OXCT2Q9BYC2 517 aaPredicted RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CCDC87Q9NVE4 849 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 ZNHIT6Q9NWK9 470 aaKnown RBP9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CYP39A1Q9NYL5 469 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 CAPN11Q9UMQ6 739 aa9.38□□□□□ -0.91
SRSF3-207ENST00000620389 ATP7AQ04656 1500 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 PPLO60437 1756 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 MOCS3O95396 460 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 HNRNPCP07910 306 aaKnown RBP eCLIP9.37□□□□□ -0.914e-13■■■■□ 22.7
SRSF3-207ENST00000620389 ALOX15P16050 662 aaPredicted RBP9.37□□□□□ -0.91
SRSF3-207ENST00000620389 KCNA3P22001 575 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 LSAMPQ13449 338 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 P3H1Q32P28 736 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 MCMDC2Q4G0Z9 681 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 TCP11X2Q5H9J9 407 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 STK11IPQ8N1F8 1099 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 UBLCP1Q8WVY7 318 aaPredicted RBP9.37□□□□□ -0.91
SRSF3-207ENST00000620389 ATXN2LQ8WWM7 1075 aaKnown RBP9.37□□□□□ -0.91
SRSF3-207ENST00000620389 KRT12Q99456 494 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 SPATA16Q9BXB7 569 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 MTFR1LQ9H019 292 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 SH2D4AQ9H788 454 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 PHAXQ9H814 394 aaKnown RBP9.37□□□□□ -0.91
SRSF3-207ENST00000620389 MLXIPQ9HAP2 919 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 GPHNQ9NQX3 736 aaPredicted RBP9.37□□□□□ -0.91
SRSF3-207ENST00000620389 CD2APQ9Y5K6 639 aa9.37□□□□□ -0.91
SRSF3-207ENST00000620389 ZNF609O15014 1411 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms