RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 PIGSQ96S52 555 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 CNTNAP4Q9C0A0 1308 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 HOXA7P31268 230 aaPredicted RBP19.37■□□□□ 0.69
DDX1-207ENST00000617198 CXCR5P32302 372 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 PAFAH1B1P43034 410 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 MATR3P43243 847 aaKnown RBP eCLIP19.37■□□□□ 0.69
DDX1-207ENST00000617198 EPHB4P54760 987 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 KCNQ4P56696 695 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 ASTE1Q2TB18 679 aaPredicted RBP19.37■□□□□ 0.69
DDX1-207ENST00000617198 TPTE2Q6XPS3 522 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 C16orf86Q6ZW13 317 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 PSMB7Q99436 277 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 EDEM3Q9BZQ6 932 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 TMEM260Q9NX78 707 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 NARFQ9UHQ1 456 aa19.37■□□□□ 0.69
DDX1-207ENST00000617198 VGLL3A8MV65 326 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 SLC7A5Q01650 507 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 DNAJC21Q5F1R6 531 aaKnown RBP19.36■□□□□ 0.69
DDX1-207ENST00000617198 HAUS3Q68CZ6 603 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 PDXDC1Q6P996 788 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 LRRC55Q6ZSA7 311 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 CACNA2D4Q7Z3S7 1137 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 CCDC155Q8N6L0 562 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 STIM2Q9P246 746 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 ANKIB1Q9P2G1 1089 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 SALL4Q9UJQ4 1053 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 COL24A1Q17RW2 1714 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 SBF2Q86WG5 1849 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 SSU72P8A0A1W2PR75 194 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 GOLGA8KD6RF30 607 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 MAPK8IP2Q13387 824 aaPredicted RBP19.36■□□□□ 0.69
DDX1-207ENST00000617198 EMBQ6PCB8 327 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 SH3GL2Q99962 352 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 RAB34Q9BZG1 259 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 SRP68Q9UHB9 627 aaKnown RBP19.36■□□□□ 0.69
DDX1-207ENST00000617198 NRAPQ86VF7 1730 aa19.36■□□□□ 0.69
DDX1-207ENST00000617198 TNFRSF8P28908 595 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 GFPT1Q06210 699 aaPredicted RBP19.35■□□□□ 0.69
DDX1-207ENST00000617198 PPFIA1Q13136 1202 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 PSMD2Q13200 908 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 FOXR2Q6PJQ5 311 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 RNF10Q8N5U6 811 aaKnown RBP19.35■□□□□ 0.69
DDX1-207ENST00000617198 RAD54LQ92698 747 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 NOX5Q96PH1 765 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 TSG101Q99816 390 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 TLR10Q9BXR5 811 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 RTFDC1Q9BY42 306 aaPredicted RBP19.35■□□□□ 0.69
DDX1-207ENST00000617198 LRRC27Q9C0I9 530 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 RIC8AQ9NPQ8 531 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 hCG_1984214I3L0E3 225 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 NCK2O43639 380 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 OPA1O60313 960 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 ATP2B2Q01814 1243 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 RASSF7Q02833 373 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 PDIA5Q14554 519 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 ARHGAP27Q6ZUM4 889 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 ZNF713Q8N859 430 aaPredicted RBP19.35■□□□□ 0.69
DDX1-207ENST00000617198 CEP95Q96GE4 821 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 SMARCAL1Q9NZC9 954 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 LEMD3Q9Y2U8 911 aa19.35■□□□□ 0.69
DDX1-207ENST00000617198 DDX60LQ5H9U9 1706 aaKnown RBP19.34■□□□□ 0.69
DDX1-207ENST00000617198 SLC37A4O43826 429 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 IRAK1P51617 712 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 MRPS25P82663 173 aaKnown RBP19.34■□□□□ 0.69
DDX1-207ENST00000617198 EHHADHQ08426 723 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 GLE1Q53GS7 698 aaKnown RBP19.34■□□□□ 0.69
DDX1-207ENST00000617198 KLHDC7AQ5VTJ3 777 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 C8orf74Q6P047 294 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 GBP6Q6ZN66 633 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 GPIHBP1Q8IV16 184 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 PROM2Q8N271 834 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 ANKRD13CQ8N6S4 541 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 DDX12PQ92771 950 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 CAVIN3Q969G5 261 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 MTMR8Q96EF0 704 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 UBA5Q9GZZ9 404 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 RIOX1Q9H6W3 641 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 EHD2Q9NZN4 543 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 TSKSQ9UJT2 592 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 POTEMA6NI47 508 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 BTDP43251 543 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 KRT79Q5XKE5 535 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 ALS2CLQ60I27 953 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 HGSNATQ68CP4 663 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 SNX29Q8TEQ0 813 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 TANGO6Q9C0B7 1094 aa19.34■□□□□ 0.69
DDX1-207ENST00000617198 RBAK-RBAKDNI3L0D1 243 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 TDP2O95551 362 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 EPB41P11171 864 aaKnown RBP19.33■□□□□ 0.68
DDX1-207ENST00000617198 ERCC3P19447 782 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 SLC1A4P43007 532 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 KCNMA1Q12791 1236 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 ZNF804AQ7Z570 1209 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 CAPS2Q9BXY5 557 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 RBM12Q9NTZ6 932 aaKnown RBP19.33■□□□□ 0.68
DDX1-207ENST00000617198 CDK5RAP2Q96SN8 1893 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 SPATA31A5Q5VU36 1347 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 SPATA31A7Q8IWB4 1347 aa19.33■□□□□ 0.68
DDX1-207ENST00000617198 USP17L5A8MUK1 530 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms