RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 CALM2P0DP24 149 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 CALM3P0DP25 149 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 DNAJB2P25686 324 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 LIFRP42702 1097 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 BFSP2Q13515 415 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 FAM47CQ5HY64 1035 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 DHX37Q8IY37 1157 aaKnown RBP11.2□□□□□ -0.62
TARDBP-218ENST00000617172 ZNF654Q8IZM8 581 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 AFG1LQ8WV93 481 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 RRP36Q96EU6 259 aaKnown RBP11.2□□□□□ -0.62
TARDBP-218ENST00000617172 CDX2Q99626 313 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-218ENST00000617172 SPZ1Q9BXG8 430 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 LSG1Q9H089 658 aaKnown RBP11.2□□□□□ -0.62
TARDBP-218ENST00000617172 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 TRMT13Q9NUP7 481 aaKnown RBP11.2□□□□□ -0.62
TARDBP-218ENST00000617172 MRVI1Q9Y6F6 885 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 TAF6LQ9Y6J9 622 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 SLC27A2O14975 620 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 PRC1O43663 620 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 CYTH3O43739 400 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 PPFIA4O75335 1185 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 MMP3P08254 477 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 ACRP10323 421 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 CCND2P30279 289 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 RFC2P35250 354 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 CCL23P55773 120 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 ANTXR2P58335 489 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 PGM5Q15124 567 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 RAB30Q15771 203 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 GNPTABQ3T906 1256 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 NFXL1Q6ZNB6 911 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 PPTC7Q8NI37 304 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 KATNAL1Q9BW62 490 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 TTYH1Q9H313 450 aaPredicted RBP11.19□□□□□ -0.62
TARDBP-218ENST00000617172 ANO2Q9NQ90 1003 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 SEC63Q9UGP8 760 aaKnown RBP11.19□□□□□ -0.62
TARDBP-218ENST00000617172 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
TARDBP-218ENST00000617172 A0A0C4DFX4 3053 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 UMODL1Q5DID0 1318 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 PARNO95453 639 aaKnown RBP11.18□□□□□ -0.62
TARDBP-218ENST00000617172 CYP2C9P11712 490 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-218ENST00000617172 HOXA13P31271 388 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-218ENST00000617172 PTGISQ16647 500 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 CREB3L3Q68CJ9 461 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 CCDC155Q8N6L0 562 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 CUL5Q93034 780 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 TIFAQ96CG3 184 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 WNT8AQ9H1J5 351 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 ZNF576Q9H609 170 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 SLC12A7Q9Y666 1083 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 SLC4A7Q9Y6M7 1214 aa11.18□□□□□ -0.62
TARDBP-218ENST00000617172 PIK3CDO00329 1044 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 SH2B2O14492 632 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-218ENST00000617172 RGS20O76081 388 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 ACTN1P12814 892 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 HOXD8P13378 290 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-218ENST00000617172 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 CELF3Q5SZQ8 465 aaKnown RBP11.17□□□□□ -0.62
TARDBP-218ENST00000617172 MYSM1Q5VVJ2 828 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 XRRA1Q6P2D8 792 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 OTOP2Q7RTS6 562 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 C7orf31Q8N865 590 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 CAGE1Q8TC20 777 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 SPATA33Q96N06 139 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 PBX4Q9BYU1 374 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
TARDBP-218ENST00000617172 LCTP09848 1927 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 F2P00734 622 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 IQCF3P0C7M6 154 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 FOSL2P15408 326 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-218ENST00000617172 NEDD9Q14511 834 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 TSGA10IPQ3SY00 556 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 SGMS1Q86VZ5 419 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 TEX2Q8IWB9 1127 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 FANCBQ8NB91 859 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 MAFAQ8NHW3 353 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-218ENST00000617172 SMARCC2Q8TAQ2 1214 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 AFAP1L1Q8TED9 768 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 PIBF1Q8WXW3 757 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 KAT2BQ92831 832 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 SCLYQ96I15 445 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 MYL10Q9BUA6 226 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 PSTPIP2Q9H939 334 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 SLC28A3Q9HAS3 691 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 CXXC1Q9P0U4 656 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-218ENST00000617172 GTF2IRD1Q9UHL9 959 aa11.16□□□□□ -0.62
TARDBP-218ENST00000617172 GRXCR1A8MXD5 290 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms