RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 FBXL7Q9UJT9 491 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 PCDHA2Q9Y5H9 948 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 HCFC2Q9Y5Z7 792 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 KDM2BQ8NHM5 1336 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 SUMO1P63165 101 aaKnown RBP7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 JAG1P78504 1218 aa7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 TARBP2Q15633 366 aaKnown RBP7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 STYK1Q6J9G0 422 aa7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 IGDCC3Q8IVU1 814 aa7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 SEC14L1Q92503 715 aa7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 CDC6Q99741 560 aa7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 COA3Q9Y2R0 106 aaPredicted RBP7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 IRAK3Q9Y616 596 aa7.71□□□□□ -1.18
SCAMP1-205ENST00000614488 TRBV23-1A0A0A0MS06 115 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 RFXAPO00287 272 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 FAM153BP0C7A2 387 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 PFKLP17858 780 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 JMYQ8N9B5 988 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 ALG3Q92685 438 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 IPO9Q96P70 1041 aaKnown RBP7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 DNAJC7Q99615 494 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 RXFP1Q9HBX9 757 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 CLDND1Q9NY35 253 aa7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 CNOT6Q9ULM6 557 aaKnown RBP7.7□□□□□ -1.18
SCAMP1-205ENST00000614488 IGFBP6P24592 240 aaPredicted RBP7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 GPR85P60893 370 aa7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 CHRNA2Q15822 529 aa7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 FOXB2Q5VYV0 432 aa7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 ZSCAN18Q8TBC5 510 aaPredicted RBP7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 CHAMP1Q96JM3 812 aa7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 CDK11AQ9UQ88 783 aaPredicted RBP7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 KCTD3Q9Y597 815 aa7.69□□□□□ -1.18
SCAMP1-205ENST00000614488 BUB1BO60566 1050 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 MSCO60682 206 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 NCAM1P13591 858 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 SSPNQ14714 243 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 KIZQ2M2Z5 673 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 KRTAP19-4Q3LI73 84 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 ZNF385BQ569K4 471 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 CIAPIN1Q6FI81 312 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 LBX2Q6XYB7 198 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 MAMDC2Q7Z304 686 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 C1QL4Q86Z23 238 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 LRRC56Q8IYG6 542 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 THAP3Q8WTV1 239 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 EXOC2Q96KP1 924 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 CDIP1Q9H305 208 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 EPB41L1Q9H4G0 881 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 SIT1Q9Y3P8 196 aa7.68□□□□□ -1.18
SCAMP1-205ENST00000614488 SGSM2O43147 1006 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 ASGR2P07307 311 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 PI3P19957 117 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 CFPP27918 469 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 PMLP29590 882 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 NCKAP1LP55160 1127 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 EMC4Q5J8M3 183 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 FAM209AQ5JX71 171 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 KCNT2Q6UVM3 1135 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 AMIGO3Q86WK7 504 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 TMEFF1Q8IYR6 380 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 IFNL3Q8IZI9 196 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 CPA5Q8WXQ8 436 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 DHRS4Q9BTZ2 278 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 LNPKQ9C0E8 428 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 PLA2G2DQ9UNK4 145 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 ZNF652Q9Y2D9 606 aa7.67□□□□□ -1.18
SCAMP1-205ENST00000614488 BLACEA4D250 179 aa7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 NUAK1O60285 661 aa7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 C6orf222P0C671 652 aaPredicted RBP7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 BMS1Q14692 1282 aaKnown RBP7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 C2orf27AQ580R0 203 aa7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 ZSWIM2Q8NEG5 633 aa7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 PTPRN2Q92932 1015 aa7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 KISS1RQ969F8 398 aaPredicted RBP7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 MRPS23Q9Y3D9 190 aaKnown RBP7.66□□□□□ -1.18
SCAMP1-205ENST00000614488 CCDC163A0A0D9SF12 145 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 AQP7O14520 342 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 DGKIO75912 1065 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 GRK2P25098 689 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 GRK3P35626 688 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 GABREP78334 506 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 CYP4F22Q6NT55 531 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 B3GNT8Q7Z7M8 397 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 FAM129CQ86XR2 697 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 MIB1Q86YT6 1006 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 TMEM151BQ8IW70 566 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 MRFAP1L1Q96HT8 127 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 ZSWIM4Q9H7M6 989 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 EPB41L4AQ9HCS5 686 aaPredicted RBP7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 PALD1Q9ULE6 856 aa7.65□□□□□ -1.18
SCAMP1-205ENST00000614488 ASXL2Q76L83 1435 aa7.64□□□□□ -1.19
SCAMP1-205ENST00000614488 HGSO14964 777 aaPredicted RBP7.64□□□□□ -1.19
SCAMP1-205ENST00000614488 NAT1P18440 290 aa7.64□□□□□ -1.19
SCAMP1-205ENST00000614488 CAP1Q01518 475 aa7.64□□□□□ -1.19
SCAMP1-205ENST00000614488 CNKSR3Q6P9H4 555 aa7.64□□□□□ -1.19
SCAMP1-205ENST00000614488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCAMP1-205ENST00000614488 BCAS3Q9H6U6 928 aa7.64□□□□□ -1.19
SCAMP1-205ENST00000614488 PPARGC1AQ9UBK2 798 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms