RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SCN10AQ9Y5Y9 1956 aa20.8■□□□□ 0.92
SMN2-213ENST00000614240 RFXAPO00287 272 aa20.8■□□□□ 0.92
SMN2-213ENST00000614240 EIF3JO75822 258 aaKnown RBP20.8■□□□□ 0.92
SMN2-213ENST00000614240 BAIAP3O94812 1187 aa20.8■□□□□ 0.92
SMN2-213ENST00000614240 GDF6Q6KF10 455 aaPredicted RBP20.8■□□□□ 0.92
SMN2-213ENST00000614240 HERC6Q8IVU3 1022 aa20.8■□□□□ 0.92
SMN2-213ENST00000614240 C7orf31Q8N865 590 aa20.8■□□□□ 0.92
SMN2-213ENST00000614240 UHRF1Q96T88 793 aaPredicted RBP20.8■□□□□ 0.92
SMN2-213ENST00000614240 ALG1Q9BT22 464 aa20.8■□□□□ 0.92
SMN2-213ENST00000614240 AMNQ9BXJ7 453 aa20.8■□□□□ 0.92
SMN2-213ENST00000614240 MRVI1Q9Y6F6 885 aa20.8■□□□□ 0.92
SMN2-213ENST00000614240 GBF1Q92538 1859 aa20.79■□□□□ 0.92
SMN2-213ENST00000614240 NR3C2P08235 984 aa20.79■□□□□ 0.92
SMN2-213ENST00000614240 SELPP16109 830 aa20.79■□□□□ 0.92
SMN2-213ENST00000614240 AFAP1L1Q8TED9 768 aa20.79■□□□□ 0.92
SMN2-213ENST00000614240 ARNTL2Q8WYA1 636 aa20.79■□□□□ 0.92
SMN2-213ENST00000614240 YTHDC1Q96MU7 727 aaKnown RBP20.79■□□□□ 0.92
SMN2-213ENST00000614240 DDX41Q9UJV9 622 aaKnown RBP20.79■□□□□ 0.92
SMN2-213ENST00000614240 KLRF2D3W0D1 207 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 MYCLP12524 364 aaPredicted RBP20.78■□□□□ 0.92
SMN2-213ENST00000614240 LAMC2Q13753 1193 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 AAK1Q2M2I8 961 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 LRRC8DQ7L1W4 858 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 SESTD1Q86VW0 696 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
SMN2-213ENST00000614240 KAT2BQ92831 832 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 ZBED2Q9BTP6 218 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 KATNAL1Q9BW62 490 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 PXMP2Q9NR77 195 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 HDAC6Q9UBN7 1215 aa20.78■□□□□ 0.92
SMN2-213ENST00000614240 TLL1O43897 1013 aa20.77■□□□□ 0.92
SMN2-213ENST00000614240 PSEN2P49810 448 aa20.77■□□□□ 0.92
SMN2-213ENST00000614240 STAG2Q8N3U4 1231 aa20.77■□□□□ 0.92
SMN2-213ENST00000614240 PCDHA1Q9Y5I3 950 aa20.77■□□□□ 0.92
SMN2-213ENST00000614240 SCN5AQ14524 2016 aa20.77■□□□□ 0.91
SMN2-213ENST00000614240 PRUNE2Q8WUY3 3088 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 EYSQ5T1H1 3165 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 PARNO95453 639 aaKnown RBP20.76■□□□□ 0.91
SMN2-213ENST00000614240 TAP1Q03518 808 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 TRDNQ13061 729 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 MFSD10Q14728 455 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 PPTC7Q8NI37 304 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 EXOC6Q8TAG9 804 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 GTF2IRD1Q9UHL9 959 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 MTCH2Q9Y6C9 303 aa20.76■□□□□ 0.91
SMN2-213ENST00000614240 ZBTB5O15062 677 aa20.75■□□□□ 0.91
SMN2-213ENST00000614240 SORBS3O60504 671 aa20.75■□□□□ 0.91
SMN2-213ENST00000614240 ZNF286BP0CG31 522 aa20.75■□□□□ 0.91
SMN2-213ENST00000614240 HSD17B4P51659 736 aa20.75■□□□□ 0.91
SMN2-213ENST00000614240 TFF2Q03403 129 aa20.75■□□□□ 0.91
SMN2-213ENST00000614240 KIAA0753Q2KHM9 967 aa20.75■□□□□ 0.91
SMN2-213ENST00000614240 KCNV1Q6PIU1 500 aa20.75■□□□□ 0.91
SMN2-213ENST00000614240 DHX38Q92620 1227 aaKnown RBP20.75■□□□□ 0.91
SMN2-213ENST00000614240 EMID1Q96A84 441 aaPredicted RBP20.75■□□□□ 0.91
SMN2-213ENST00000614240 CTAGE1Q96RT6 745 aa20.75■□□□□ 0.91
SMN2-213ENST00000614240 MAP3K20Q9NYL2 800 aaKnown RBP20.75■□□□□ 0.91
SMN2-213ENST00000614240 EPOPA6NHQ4 379 aa20.74■□□□□ 0.91
SMN2-213ENST00000614240 CKBP12277 381 aa20.74■□□□□ 0.91
SMN2-213ENST00000614240 POU3F3P20264 500 aaPredicted RBP20.74■□□□□ 0.91
SMN2-213ENST00000614240 HOXA13P31271 388 aaPredicted RBP20.74■□□□□ 0.91
SMN2-213ENST00000614240 WDR5P61964 334 aaKnown RBP20.74■□□□□ 0.91
SMN2-213ENST00000614240 TRAF1Q13077 416 aa20.74■□□□□ 0.91
SMN2-213ENST00000614240 CNKSR3Q6P9H4 555 aa20.74■□□□□ 0.91
SMN2-213ENST00000614240 HOMER1Q86YM7 354 aa20.74■□□□□ 0.91
SMN2-213ENST00000614240 SPATA33Q96N06 139 aa20.74■□□□□ 0.91
SMN2-213ENST00000614240 PDCD2LQ9BRP1 358 aa20.74■□□□□ 0.91
SMN2-213ENST00000614240 CDH23Q9H251 3354 aa20.74■□□□□ 0.91
SMN2-213ENST00000614240 CHD9Q3L8U1 2897 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 OPLAHO14841 1288 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 ARHGEF15O94989 841 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 PTK7Q13308 1070 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 SEC23AQ15436 765 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 KRT40Q6A162 431 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 CYB5R4Q7L1T6 521 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 MAD2L2Q9UI95 211 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 LAMA4Q16363 1823 aa20.73■□□□□ 0.91
SMN2-213ENST00000614240 ABHD14A-ACY1A0A1B0GW23 586 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 ERICH2A1L162 156 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
SMN2-213ENST00000614240 PPP1R11O60927 126 aaPredicted RBP20.72■□□□□ 0.91
SMN2-213ENST00000614240 NBNO60934 754 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 PPFIA4O75335 1185 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 GGPS1O95749 300 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 F2P00734 622 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 POLR2MP0CAP2 368 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 BMP1P13497 986 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 COL9A1P20849 921 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 RBL2Q08999 1139 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 GPNMBQ14956 572 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 CELF3Q5SZQ8 465 aaKnown RBP20.72■□□□□ 0.91
SMN2-213ENST00000614240 STOX1Q6ZVD7 989 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 TMCO2Q7Z6W1 182 aaPredicted RBP20.72■□□□□ 0.91
SMN2-213ENST00000614240 FCHSD1Q86WN1 690 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 SAMD3Q8N6K7 520 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 MLXIPQ9HAP2 919 aa20.72■□□□□ 0.91
SMN2-213ENST00000614240 PALM3A6NDB9 673 aaPredicted RBP20.71■□□□□ 0.91
SMN2-213ENST00000614240 IFIT3O14879 490 aaKnown RBP20.71■□□□□ 0.91
SMN2-213ENST00000614240 CCND2P30279 289 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 KCNQ1P51787 676 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 DEFB103AP81534 67 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms