RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 RETREG2Q8NC44 543 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 RUFY2Q8WXA3 655 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 MAP3K20Q9NYL2 800 aaKnown RBP20.68■□□□□ 0.9
SSBP1-215ENST00000612337 DDX41Q9UJV9 622 aaKnown RBP20.68■□□□□ 0.9
SSBP1-215ENST00000612337 NOD1Q9Y239 953 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
SSBP1-215ENST00000612337 PCDHA11Q9Y5I1 949 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 U3KPZ7 1027 aaPredicted RBP20.68■□□□□ 0.9
SSBP1-215ENST00000612337 TANC1Q9C0D5 1861 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 CYP21A2P08686 494 aa20.67■□□□□ 0.9
SSBP1-215ENST00000612337 IQCF3P0C7M6 154 aa20.67■□□□□ 0.9
SSBP1-215ENST00000612337 ACTN1P12814 892 aa20.67■□□□□ 0.9
SSBP1-215ENST00000612337 CASTP20810 708 aaKnown RBP20.67■□□□□ 0.9
SSBP1-215ENST00000612337 ADGRE1Q14246 886 aa20.67■□□□□ 0.9
SSBP1-215ENST00000612337 CHST3Q7LGC8 479 aa20.67■□□□□ 0.9
SSBP1-215ENST00000612337 SESTD1Q86VW0 696 aa20.67■□□□□ 0.9
SSBP1-215ENST00000612337 KAT2BQ92831 832 aa20.67■□□□□ 0.9
SSBP1-215ENST00000612337 EMID1Q96A84 441 aaPredicted RBP20.67■□□□□ 0.9
SSBP1-215ENST00000612337 REV3LO60673 3130 aa20.67■□□□□ 0.9
SSBP1-215ENST00000612337 XIRP2A4UGR9 3374 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 PPP1R11O60927 126 aaPredicted RBP20.66■□□□□ 0.9
SSBP1-215ENST00000612337 CHMLP26374 656 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 CHMP4BP1P59074 171 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 PTGISQ16647 500 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 DGKDQ16760 1214 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 PPP2R2DQ66LE6 453 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 SAMD3Q8N6K7 520 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 SYMPKQ92797 1274 aaKnown RBP20.66■□□□□ 0.9
SSBP1-215ENST00000612337 PCDHA1Q9Y5I3 950 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 MRVI1Q9Y6F6 885 aa20.66■□□□□ 0.9
SSBP1-215ENST00000612337 MYOGP15173 224 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 PTH1RQ03431 593 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 LAMC2Q13753 1193 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 GRM4Q14833 912 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 STOX1Q6ZVD7 989 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 CCDC155Q8N6L0 562 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 CAGE1Q8TC20 777 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 PDCD2LQ9BRP1 358 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 RIOX1Q9H6W3 641 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 TET1Q8NFU7 2136 aa20.65■□□□□ 0.9
SSBP1-215ENST00000612337 TRIP12Q14669 1992 aaPredicted RBP20.65■□□□□ 0.9
SSBP1-215ENST00000612337 BAZ2BQ9UIF8 2168 aaKnown RBP20.64■□□□□ 0.89
SSBP1-215ENST00000612337 ERICH2A1L162 156 aa20.64■□□□□ 0.89
SSBP1-215ENST00000612337 IFIT3O14879 490 aaKnown RBP20.64■□□□□ 0.89
SSBP1-215ENST00000612337 TRAF1Q13077 416 aa20.64■□□□□ 0.89
SSBP1-215ENST00000612337 SLC35G1Q2M3R5 365 aa20.64■□□□□ 0.89
SSBP1-215ENST00000612337 GDF6Q6KF10 455 aaPredicted RBP20.64■□□□□ 0.89
SSBP1-215ENST00000612337 PPTC7Q8NI37 304 aa20.64■□□□□ 0.89
SSBP1-215ENST00000612337 AFAP1L1Q8TED9 768 aa20.64■□□□□ 0.89
SSBP1-215ENST00000612337 PPM1EQ8WY54 764 aa20.64■□□□□ 0.89
SSBP1-215ENST00000612337 CTAGE1Q96RT6 745 aa20.64■□□□□ 0.89
SSBP1-215ENST00000612337 SLC9A7Q96T83 725 aa20.64■□□□□ 0.89
SSBP1-215ENST00000612337 FTOQ9C0B1 505 aaKnown RBP eCLIP20.64■□□□□ 0.89
SSBP1-215ENST00000612337 RGS20O76081 388 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 IGFBP4P22692 258 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 TMEM67Q5HYA8 995 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 TJAP1Q5JTD0 557 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 KCNV1Q6PIU1 500 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 RALYLQ86SE5 291 aaKnown RBP20.63■□□□□ 0.89
SSBP1-215ENST00000612337 VSIG10LQ86VR7 867 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 HOMER1Q86YM7 354 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 NCOA7Q8NI08 942 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 PHOSPHO2Q8TCD6 241 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 PIGSQ96S52 555 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 KATNAL1Q9BW62 490 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 PRDM6Q9NQX0 595 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 MYH7BA7E2Y1 1941 aa20.63■□□□□ 0.89
SSBP1-215ENST00000612337 E7EWF7 191 aa20.62■□□□□ 0.89
SSBP1-215ENST00000612337 SGSM2O43147 1006 aa20.62■□□□□ 0.89
SSBP1-215ENST00000612337 MYCLP12524 364 aaPredicted RBP20.62■□□□□ 0.89
SSBP1-215ENST00000612337 HOXA13P31271 388 aaPredicted RBP20.62■□□□□ 0.89
SSBP1-215ENST00000612337 TROAPQ12815 778 aa20.62■□□□□ 0.89
SSBP1-215ENST00000612337 WTAPQ15007 396 aa20.62■□□□□ 0.89
SSBP1-215ENST00000612337 SART3Q15020 963 aaKnown RBP20.62■□□□□ 0.89
SSBP1-215ENST00000612337 PGM5Q15124 567 aa20.62■□□□□ 0.89
SSBP1-215ENST00000612337 DHX37Q8IY37 1157 aaKnown RBP20.62■□□□□ 0.89
SSBP1-215ENST00000612337 SENP2Q9HC62 589 aa20.62■□□□□ 0.89
SSBP1-215ENST00000612337 GTF2IRD1Q9UHL9 959 aa20.62■□□□□ 0.89
SSBP1-215ENST00000612337 TAF6LQ9Y6J9 622 aa20.62■□□□□ 0.89
SSBP1-215ENST00000612337 GCOM1H8Y6P7 765 aaPredicted RBP20.61■□□□□ 0.89
SSBP1-215ENST00000612337 CYTH3O43739 400 aa20.61■□□□□ 0.89
SSBP1-215ENST00000612337 BAIAP3O94812 1187 aa20.61■□□□□ 0.89
SSBP1-215ENST00000612337 F2P00734 622 aa20.61■□□□□ 0.89
SSBP1-215ENST00000612337 POLR2MP0CAP2 368 aa20.61■□□□□ 0.89
SSBP1-215ENST00000612337 HOXD8P13378 290 aaPredicted RBP20.61■□□□□ 0.89
SSBP1-215ENST00000612337 PSEN2P49810 448 aa20.61■□□□□ 0.89
SSBP1-215ENST00000612337 RBL2Q08999 1139 aa20.61■□□□□ 0.89
SSBP1-215ENST00000612337 C7orf31Q8N865 590 aa20.61■□□□□ 0.89
SSBP1-215ENST00000612337 DHX38Q92620 1227 aaKnown RBP20.61■□□□□ 0.89
SSBP1-215ENST00000612337 HDAC6Q9UBN7 1215 aa20.61■□□□□ 0.89
SSBP1-215ENST00000612337 PNMA6FA0A0J9YX94 578 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 HAS3O00219 553 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 PPFIA4O75335 1185 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 PARNO95453 639 aaKnown RBP20.6■□□□□ 0.89
SSBP1-215ENST00000612337 CA3P07451 260 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 ZNF286BP0CG31 522 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 SELPP16109 830 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 MFSD10Q14728 455 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 KIAA0753Q2KHM9 967 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 CELF3Q5SZQ8 465 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms