RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 C11orf74Q86VG3 221 aa6.75□□□□□ -1.33
LINC00397-202ENST00000606785 SSBP4Q9BWG4 385 aaPredicted RBP6.75□□□□□ -1.33
LINC00397-202ENST00000606785 EMC7Q9NPA0 242 aa6.75□□□□□ -1.33
LINC00397-202ENST00000606785 THG1LQ9NWX6 298 aaKnown RBP6.75□□□□□ -1.33
LINC00397-202ENST00000606785 CCDC66A2RUB6 948 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 GSTA4O15217 222 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 CAND2O75155 1236 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 ATP2A2P16615 1042 aaKnown RBP6.74□□□□□ -1.33
LINC00397-202ENST00000606785 ATF3P18847 181 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 FAM102BQ5T8I3 360 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 NXNQ6DKJ4 435 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 C14orf80Q86SX3 495 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 TSPYL5Q86VY4 417 aaPredicted RBP6.74□□□□□ -1.33
LINC00397-202ENST00000606785 USHBP1Q8N6Y0 703 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 PANK1Q8TE04 598 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 CHTF18Q8WVB6 975 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 FBXW5Q969U6 566 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 MYH16Q9H6N6 1097 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 ZNF180Q9UJW8 692 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 TCFL5Q9UL49 500 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 PCDHA2Q9Y5H9 948 aa6.74□□□□□ -1.33
LINC00397-202ENST00000606785 LOC102724159A0A0B4J2E5 919 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 FAM47E-STBD1D6RA91 191 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 FGF10O15520 208 aaPredicted RBP6.73□□□□□ -1.33
LINC00397-202ENST00000606785 RFPL1O75677 317 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 ABLIM3O94929 683 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 GRK2P25098 689 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 GRK3P35626 688 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 DNM2P50570 870 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 KPNA1P52294 538 aaPredicted RBP6.73□□□□□ -1.33
LINC00397-202ENST00000606785 ST5P78524 1137 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 CYP27A1Q02318 531 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 HLTFQ14527 1009 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC00397-202ENST00000606785 PWP2Q15269 919 aaKnown RBP6.73□□□□□ -1.33
LINC00397-202ENST00000606785 PTPN21Q16825 1174 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 INF2Q27J81 1249 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 MBLAC2Q68D91 279 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 C16orf59Q7L2K0 433 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 TCEAL8Q8IYN2 117 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 CBARPQ8N350 705 aaPredicted RBP6.73□□□□□ -1.33
LINC00397-202ENST00000606785 TTC8Q8TAM2 541 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 PTCHD1Q96NR3 888 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 IPPKQ9H8X2 491 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 SPTLC3Q9NUV7 552 aa6.73□□□□□ -1.33
LINC00397-202ENST00000606785 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.72□□□□□ -1.33
LINC00397-202ENST00000606785 SSU72P8A0A1W2PR75 194 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 PTPDC1A2A3K4 754 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 MYO1BO43795 1136 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
LINC00397-202ENST00000606785 SESN3P58005 492 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 ERVK-21P61565 698 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 ARHGAP44Q17R89 818 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 ABCB5Q2M3G0 1257 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 RGL3Q3MIN7 710 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 MAP9Q49MG5 647 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 ZNF765Q7L2R6 523 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 PMM1Q92871 262 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 RHOBTB2Q9BYZ6 727 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 FOXP3Q9BZS1 431 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 LUC7LQ9NQ29 371 aaKnown RBP6.72□□□□□ -1.33
LINC00397-202ENST00000606785 AP5S1Q9NUS5 200 aa6.72□□□□□ -1.33
LINC00397-202ENST00000606785 HMX2A2RU54 273 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 GOLGA6CA6NDK9 693 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 GOLGA6BA6NDN3 693 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 FAM170BA6NMN3 283 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 KRT18P05783 430 aaKnown RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 GOLGA6DP0CG33 693 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 ZSCAN20P17040 1043 aaPredicted RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 TPP2P29144 1249 aaPredicted RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 OXCT1P55809 520 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 RHBDL3P58872 404 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 LSAMPQ13449 338 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 MLC1Q15049 377 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 GAB4Q2WGN9 574 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 INAVAQ3KP66 663 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 GORABQ5T7V8 394 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 CDKAL1Q5VV42 579 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 CREB3L3Q68CJ9 461 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 RNF111Q6ZNA4 994 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 OTOP1Q7RTM1 612 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 HDGFL2Q7Z4V5 671 aaPredicted RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 CPNE8Q86YQ8 564 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 CISD2Q8N5K1 135 aaKnown RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 C2orf69Q8N8R5 385 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 MORC4Q8TE76 937 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 JPH3Q8WXH2 748 aaPredicted RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 AHCYL2Q96HN2 611 aaKnown RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 SCYL1Q96KG9 808 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 CDADC1Q9BWV3 514 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 SLC13A1Q9BZW2 595 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 C7orf69Q9H7B7 122 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 GOLGA6AQ9NYA3 693 aa6.71□□□□□ -1.34
LINC00397-202ENST00000606785 PPARGC1AQ9UBK2 798 aaKnown RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 NOB1Q9ULX3 412 aaKnown RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
LINC00397-202ENST00000606785 WASH4PA8MWX3 477 aa6.7□□□□□ -1.34
LINC00397-202ENST00000606785 PLIN1O60240 522 aa6.7□□□□□ -1.34
LINC00397-202ENST00000606785 TBC1D8O95759 1140 aa6.7□□□□□ -1.34
LINC00397-202ENST00000606785 MYBL2P10244 700 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms