RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 COL25A1Q9BXS0 654 aaPredicted RBP17.62■□□□□ 0.41
TGFB1-202ENST00000597453 MTIF3Q9H2K0 278 aaKnown RBP17.62■□□□□ 0.41
TGFB1-202ENST00000597453 NR3C2P08235 984 aa17.61■□□□□ 0.41
TGFB1-202ENST00000597453 CHMP4BP1P59074 171 aa17.61■□□□□ 0.41
TGFB1-202ENST00000597453 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
TGFB1-202ENST00000597453 RPUSD2Q8IZ73 545 aaKnown RBP17.61■□□□□ 0.41
TGFB1-202ENST00000597453 PIGSQ96S52 555 aa17.61■□□□□ 0.41
TGFB1-202ENST00000597453 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
TGFB1-202ENST00000597453 YBX2Q9Y2T7 364 aaKnown RBP17.61■□□□□ 0.41
TGFB1-202ENST00000597453 PCDHA1Q9Y5I3 950 aa17.61■□□□□ 0.41
TGFB1-202ENST00000597453 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
TGFB1-202ENST00000597453 CYTH3O43739 400 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 EIF3JO75822 258 aaKnown RBP17.6■□□□□ 0.41
TGFB1-202ENST00000597453 HOXA13P31271 388 aaPredicted RBP17.6■□□□□ 0.41
TGFB1-202ENST00000597453 ANTXR2P58335 489 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 PTPN11Q06124 597 aaPredicted RBP17.6■□□□□ 0.41
TGFB1-202ENST00000597453 TROAPQ12815 778 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 RAB30Q15771 203 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 DEFB128Q7Z7B8 93 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
TGFB1-202ENST00000597453 USP38Q8NB14 1042 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 NCOA7Q8NI08 942 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 KAT2BQ92831 832 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 CTAGE1Q96RT6 745 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 NKX2-4Q9H2Z4 354 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 PRDM12Q9H4Q4 367 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 RIOX1Q9H6W3 641 aa17.6■□□□□ 0.41
TGFB1-202ENST00000597453 ERICH2A1L162 156 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 ZBBXA8MT70 800 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 RGS20O76081 388 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 RABGGTBP53611 331 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 WTAPQ15007 396 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 IL31RAQ8NI17 732 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 MAP4K1Q92918 833 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 PDCD2LQ9BRP1 358 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 MSRAQ9UJ68 235 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 SLC4A7Q9Y6M7 1214 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 CHD7Q9P2D1 2997 aa17.59■□□□□ 0.41
TGFB1-202ENST00000597453 TTC28Q96AY4 2481 aa17.58■□□□□ 0.41
TGFB1-202ENST00000597453 PITPNM1O00562 1244 aa17.58■□□□□ 0.4
TGFB1-202ENST00000597453 PFKMP08237 780 aa17.58■□□□□ 0.4
TGFB1-202ENST00000597453 IQCF3P0C7M6 154 aa17.58■□□□□ 0.4
TGFB1-202ENST00000597453 MYCLP12524 364 aaPredicted RBP17.58■□□□□ 0.4
TGFB1-202ENST00000597453 TMEM67Q5HYA8 995 aa17.58■□□□□ 0.4
TGFB1-202ENST00000597453 GDF6Q6KF10 455 aaPredicted RBP17.58■□□□□ 0.4
TGFB1-202ENST00000597453 MB21D2Q8IYB1 491 aaPredicted RBP17.58■□□□□ 0.4
TGFB1-202ENST00000597453 EMID1Q96A84 441 aaPredicted RBP17.58■□□□□ 0.4
TGFB1-202ENST00000597453 ZFP91Q96JP5 570 aaPredicted RBP17.58■□□□□ 0.4
TGFB1-202ENST00000597453 NOD1Q9Y239 953 aa17.58■□□□□ 0.4
TGFB1-202ENST00000597453 RBM8AQ9Y5S9 174 aaKnown RBP17.58■□□□□ 0.4
TGFB1-202ENST00000597453 PTPRSQ13332 1948 aa17.58■□□□□ 0.4
TGFB1-202ENST00000597453 MYOGP15173 224 aa17.57■□□□□ 0.4
TGFB1-202ENST00000597453 CASTP20810 708 aaKnown RBP17.57■□□□□ 0.4
TGFB1-202ENST00000597453 ADGRE1Q14246 886 aa17.57■□□□□ 0.4
TGFB1-202ENST00000597453 PGM5Q15124 567 aa17.57■□□□□ 0.4
TGFB1-202ENST00000597453 PTGISQ16647 500 aa17.57■□□□□ 0.4
TGFB1-202ENST00000597453 SESTD1Q86VW0 696 aa17.57■□□□□ 0.4
TGFB1-202ENST00000597453 IGDCC4Q8TDY8 1250 aa17.57■□□□□ 0.4
TGFB1-202ENST00000597453 MAP3K20Q9NYL2 800 aaKnown RBP17.57■□□□□ 0.4
TGFB1-202ENST00000597453 DOCK5Q9H7D0 1870 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 PNMA6FA0A0J9YX94 578 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 SORBS3O60504 671 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 ZNF286BP0CG31 522 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 ATP2A2P16615 1042 aaKnown RBP17.56■□□□□ 0.4
TGFB1-202ENST00000597453 RFC2P35250 354 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 LAMC2Q13753 1193 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 COL9A3Q14050 684 aaPredicted RBP17.56■□□□□ 0.4
TGFB1-202ENST00000597453 SART3Q15020 963 aaKnown RBP17.56■□□□□ 0.4
TGFB1-202ENST00000597453 DGKDQ16760 1214 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 CATIPQ7Z7H3 387 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 VSIG10LQ86VR7 867 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 RETREG2Q8NC44 543 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 PPTC7Q8NI37 304 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 PIBF1Q8WXW3 757 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 GAS2L1Q99501 681 aaPredicted RBP17.56■□□□□ 0.4
TGFB1-202ENST00000597453 SLC28A3Q9HAS3 691 aa17.56■□□□□ 0.4
TGFB1-202ENST00000597453 GCOM1H8Y6P7 765 aaPredicted RBP17.55■□□□□ 0.4
TGFB1-202ENST00000597453 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 POLR2MP0CAP2 368 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 PSEN2P49810 448 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 BFSP2Q13515 415 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 FCHSD1Q86WN1 690 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 DHX37Q8IY37 1157 aaKnown RBP17.55■□□□□ 0.4
TGFB1-202ENST00000597453 SAMD3Q8N6K7 520 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 DHX38Q92620 1227 aaKnown RBP17.55■□□□□ 0.4
TGFB1-202ENST00000597453 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.45e-7■■■■■ 43.5
TGFB1-202ENST00000597453 ALG1Q9BT22 464 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 MYL10Q9BUA6 226 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 LY9Q9HBG7 655 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 PRDM6Q9NQX0 595 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 HDAC6Q9UBN7 1215 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 GTF2IRD1Q9UHL9 959 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 PCDHA11Q9Y5I1 949 aa17.55■□□□□ 0.4
TGFB1-202ENST00000597453 HAS3O00219 553 aa17.54■□□□□ 0.4
TGFB1-202ENST00000597453 GGPS1O95749 300 aa17.54■□□□□ 0.4
TGFB1-202ENST00000597453 F2P00734 622 aa17.54■□□□□ 0.4
TGFB1-202ENST00000597453 UBA1P22314 1058 aaKnown RBP17.54■□□□□ 0.4
TGFB1-202ENST00000597453 SP2Q02086 613 aa17.54■□□□□ 0.4
TGFB1-202ENST00000597453 GPNMBQ14956 572 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms