RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CABYRO75952 493 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 CPT1AP50416 773 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 GNPTABQ3T906 1256 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 CCSAPQ6IQ19 270 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 SLC39A5Q6ZMH5 540 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 CCDC148Q8NFR7 591 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 OR6J1Q8NGC5 347 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 GLT1D1Q96MS3 346 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 C6orf50Q9HD87 102 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 TPCN1Q9ULQ1 816 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 MRVI1Q9Y6F6 885 aa19.83■□□□□ 0.77
SHKBP1-212ENST00000596163 DEXIO95424 95 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 GH1P01241 217 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 ASGR1P07306 291 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 TGFB3P10600 412 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 GNA11P29992 359 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 RBM25P49756 843 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 ATN1P54259 1190 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 PRPF38BQ5VTL8 546 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 PCNX4Q63HM2 1172 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 CCDC62Q6P9F0 684 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 IL27Q8NEV9 243 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 VTI1AQ96AJ9 217 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 STARD7Q9NQZ5 370 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 PCDHA6Q9UN73 950 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 PCDHA8Q9Y5H6 950 aa19.82■□□□□ 0.76
SHKBP1-212ENST00000596163 ELP1O95163 1332 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 TNRC18O15417 2968 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 BRCA2P51587 3418 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 A0A1W2PQ45 241 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 A0A1W2PQY0 241 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 ESYT2A0FGR8 921 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 MYADML2A6NDP7 307 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 KPNA6O60684 536 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 BEX3Q00994 111 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 PKN1Q16512 942 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 UBE2SQ16763 222 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 LRRC26Q2I0M4 334 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 C1orf53Q5VUE5 145 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 NLRX1Q86UT6 975 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 BICD2Q8TD16 824 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 SH3GLB2Q9NR46 395 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 POLR3EQ9NVU0 708 aa19.81■□□□□ 0.76
SHKBP1-212ENST00000596163 LCTP09848 1927 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 CTAGE5O15320 804 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 SCRN1Q12765 414 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 AP3B2Q13367 1082 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 TMEM63BQ5T3F8 832 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 TYW1BQ6NUM6 668 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 FAM177A1Q8N128 213 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 IL31RAQ8NI17 732 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 SEZ6LQ9BYH1 1024 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 ZMYND12Q9H0C1 365 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 DDX41Q9UJV9 622 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 MCM3APO60318 1980 aa19.8■□□□□ 0.76
SHKBP1-212ENST00000596163 RTP1P59025 263 aa19.79■□□□□ 0.76
SHKBP1-212ENST00000596163 LAMC2Q13753 1193 aa19.79■□□□□ 0.76
SHKBP1-212ENST00000596163 LY6KQ17RY6 165 aa19.79■□□□□ 0.76
SHKBP1-212ENST00000596163 C7orf61Q8IZ16 206 aa19.79■□□□□ 0.76
SHKBP1-212ENST00000596163 A0A0U1RQG5 324 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 A6NJR5 290 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 FIBPO43427 364 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 RGS20O76081 388 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 ARIH2O95376 493 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 ICAM3P32942 547 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 MRPS9P82933 396 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 SNX17Q15036 470 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 DHX37Q8IY37 1157 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 WASF1Q92558 559 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 COPS5Q92905 334 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 CDHR1Q96JP9 859 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 INPP4AQ96PE3 977 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 RTEL1Q9NZ71 1219 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 PRKAG2Q9UGJ0 569 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 LIMCH1Q9UPQ0 1083 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 ATP11BQ9Y2G3 1177 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 FRMPD3Q5JV73 1810 aa19.78■□□□□ 0.76
SHKBP1-212ENST00000596163 H0YGN5 161 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 MAFGO15525 162 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 PPFIA3O75145 1194 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 XBP1P17861 261 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 NLRP5P59047 1200 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 IRX5P78411 483 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 NEDD9Q14511 834 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 RABEP1Q15276 862 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 CXCL17Q6UXB2 119 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 REXO1Q8N1G1 1221 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 EMID1Q96A84 441 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 ZSCAN31Q96LW9 406 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 ANO3Q9BYT9 981 aa19.77■□□□□ 0.76
SHKBP1-212ENST00000596163 MROH7Q68CQ1 1323 aa19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 SPATA31C2B4DYI2 1134 aa19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 MYL3P08590 195 aa19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 CLK2P49760 499 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 ARHGAP1Q07960 439 aa19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 ME3Q16798 604 aa19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 GALNT17Q6IS24 598 aa19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 GIMAP8Q8ND71 665 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 GTF3C6Q969F1 213 aa19.76■□□□□ 0.75
SHKBP1-212ENST00000596163 GPRASP2Q96D09 838 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms