RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 NOD1Q9Y239 953 aa17.95■□□□□ 0.46
FOXA3-202ENST00000594297 BRWD1Q9NSI6 2320 aa17.95■□□□□ 0.46
FOXA3-202ENST00000594297 LOC102724159A0A0B4J2E5 919 aa17.94■□□□□ 0.46
FOXA3-202ENST00000594297 RBAK-RBAKDNI3L0D1 243 aa17.94■□□□□ 0.46
FOXA3-202ENST00000594297 PSMA5P28066 241 aa17.94■□□□□ 0.46
FOXA3-202ENST00000594297 PTPN11Q06124 597 aaPredicted RBP17.94■□□□□ 0.46
FOXA3-202ENST00000594297 TRDNQ13061 729 aa17.94■□□□□ 0.46
FOXA3-202ENST00000594297 GPNMBQ14956 572 aa17.94■□□□□ 0.46
FOXA3-202ENST00000594297 PWP2Q15269 919 aaKnown RBP17.94■□□□□ 0.46
FOXA3-202ENST00000594297 BRDTQ58F21 947 aaPredicted RBP17.94■□□□□ 0.46
FOXA3-202ENST00000594297 CTAGE1Q96RT6 745 aa17.94■□□□□ 0.46
FOXA3-202ENST00000594297 LMCD1Q9NZU5 365 aa17.94■□□□□ 0.46
FOXA3-202ENST00000594297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.94■□□□□ 0.46
FOXA3-202ENST00000594297 MUC6Q6W4X9 2439 aa17.94■□□□□ 0.46
FOXA3-202ENST00000594297 A6NJR5 290 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 TSPY2A6NKD2 308 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 PRR33A8MZF0 331 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 SLC27A2O14975 620 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 NKRFO15226 690 aaKnown RBP eCLIP17.93■□□□□ 0.46
FOXA3-202ENST00000594297 PCP11498 1178 aaKnown RBP17.93■□□□□ 0.46
FOXA3-202ENST00000594297 CALML3P27482 149 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 SLC16A2P36021 539 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 CHMP4BP1P59074 171 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 TCTN1Q2MV58 587 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 TTBK2Q6IQ55 1244 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 AFAP1L1Q8TED9 768 aa17.93■□□□□ 0.46
FOXA3-202ENST00000594297 ARIH2O95376 493 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 HMGB1P09429 215 aaKnown RBP17.92■□□□□ 0.46
FOXA3-202ENST00000594297 IL9P15248 144 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 EDNRBP24530 442 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 NT5C2P49902 561 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 PDE4DQ08499 809 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 PTGISQ16647 500 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 PPP4R3BQ5MIZ7 849 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 SYDE2Q5VT97 1194 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 FAM178BQ8IXR5 827 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 CCDC155Q8N6L0 562 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 CAGE1Q8TC20 777 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 SCFD2Q8WU76 684 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 DHX38Q92620 1227 aaKnown RBP17.92■□□□□ 0.46
FOXA3-202ENST00000594297 ZBED2Q9BTP6 218 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 CNNM2Q9H8M5 875 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 SUGCTQ9HAC7 445 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 INCENPQ9NQS7 918 aa17.92■□□□□ 0.46
FOXA3-202ENST00000594297 LINC01553A4QN01 128 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 KPNA6O60684 536 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 KCNA5P22460 613 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 CTDSPL2Q05D32 466 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 TSGA10IPQ3SY00 556 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 LEXMQ3ZCV2 418 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 GDF6Q6KF10 455 aaPredicted RBP17.91■□□□□ 0.46
FOXA3-202ENST00000594297 CNKSR3Q6P9H4 555 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 LRRC8DQ7L1W4 858 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 RALYLQ86SE5 291 aaKnown RBP17.91■□□□□ 0.46
FOXA3-202ENST00000594297 GJD3Q8N144 294 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.91■□□□□ 0.46
FOXA3-202ENST00000594297 DCAF4Q8WV16 495 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 CLEC4DQ8WXI8 215 aa17.91■□□□□ 0.46
FOXA3-202ENST00000594297 FRMPD2Q68DX3 1309 aaPredicted RBP17.91■□□□□ 0.46
FOXA3-202ENST00000594297 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.9■□□□□ 0.46
FOXA3-202ENST00000594297 FOXP2O15409 715 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 GJB5O95377 273 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 CYP21A2P08686 494 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 SELPP16109 830 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 SSTR3P32745 418 aaPredicted RBP17.9■□□□□ 0.46
FOXA3-202ENST00000594297 HAND2P61296 217 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 ERVK-21P61565 698 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 BTNL9Q6UXG8 535 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 RNF207Q6ZRF8 634 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 TGS1Q96RS0 853 aaKnown RBP17.9■□□□□ 0.46
FOXA3-202ENST00000594297 ANAPC4Q9UJX5 808 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 PIEZO1Q92508 2521 aa17.9■□□□□ 0.46
FOXA3-202ENST00000594297 NBNO60934 754 aa17.89■□□□□ 0.45
FOXA3-202ENST00000594297 CXCL10P02778 98 aa17.89■□□□□ 0.45
FOXA3-202ENST00000594297 TXNP10599 105 aaKnown RBP17.89■□□□□ 0.45
FOXA3-202ENST00000594297 NOVP48745 357 aa17.89■□□□□ 0.45
FOXA3-202ENST00000594297 RPS6P62753 249 aaKnown RBP17.89■□□□□ 0.45
FOXA3-202ENST00000594297 RBL2Q08999 1139 aa17.89■□□□□ 0.45
FOXA3-202ENST00000594297 KCNB2Q92953 911 aa17.89■□□□□ 0.45
FOXA3-202ENST00000594297 KRT23Q9C075 422 aa17.89■□□□□ 0.45
FOXA3-202ENST00000594297 TOMM22Q9NS69 142 aa17.89■□□□□ 0.45
FOXA3-202ENST00000594297 SNX14Q9Y5W7 946 aa17.89■□□□□ 0.45
FOXA3-202ENST00000594297 MMP3P08254 477 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 MRE11P49959 708 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 RABEP1Q15276 862 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 PTCRAQ6ISU1 281 aaPredicted RBP17.88■□□□□ 0.45
FOXA3-202ENST00000594297 FAM117BQ6P1L5 589 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 SESTD1Q86VW0 696 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 NCOA7Q8NI08 942 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 AFG1LQ8WV93 481 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 NEK1Q96PY6 1258 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 UIMC1Q96RL1 719 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 RAD9AQ99638 391 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 TM6SF1Q9BZW5 370 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 GPCPD1Q9NPB8 672 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 KIAA1217Q5T5P2 1943 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 MICAL3Q7RTP6 2002 aa17.88■□□□□ 0.45
FOXA3-202ENST00000594297 E7EWF7 191 aa17.87■□□□□ 0.45
FOXA3-202ENST00000594297 RANBP6O60518 1105 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms