RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 GRXCR2A6NFK2 248 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 RFXAPO00287 272 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 GPAA1O43292 621 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 FAM47CQ5HY64 1035 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 TICAM2Q86XR7 235 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 MRPL38Q96DV4 380 aaKnown RBP10.28□□□□□ -0.76
SMAD4-215ENST00000592911 MFSD14AQ96MC6 490 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 KATNAL1Q9BW62 490 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 LRRCC1Q9C099 1032 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 SUGCTQ9HAC7 445 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 EPB41L4AQ9HCS5 686 aaPredicted RBP10.28□□□□□ -0.76
SMAD4-215ENST00000592911 ZBTB40Q9NUA8 1239 aa10.28□□□□□ -0.76
SMAD4-215ENST00000592911 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
SMAD4-215ENST00000592911 MYH6P13533 1939 aa10.27□□□□□ -0.76
SMAD4-215ENST00000592911 RNF113AO15541 343 aaKnown RBP10.27□□□□□ -0.77
SMAD4-215ENST00000592911 MYL3P08590 195 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 NHLH1Q02575 133 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 PDE4DQ08499 809 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 IKBKEQ14164 716 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 PTGISQ16647 500 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 MUM1L1Q5H9M0 696 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-215ENST00000592911 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 MAMSTRQ6ZN01 415 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 LRRC8DQ7L1W4 858 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 EEPD1Q7L9B9 569 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 IFNL3Q8IZI9 196 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 OSBP2Q969R2 916 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 EMID1Q96A84 441 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-215ENST00000592911 POP1Q99575 1024 aaKnown RBP10.27□□□□□ -0.77
SMAD4-215ENST00000592911 CERS4Q9HA82 394 aa10.27□□□□□ -0.77
SMAD4-215ENST00000592911 TECTAO75443 2155 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 KAT6AQ92794 2004 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 PTPRZ1P23471 2315 aaPredicted RBP10.26□□□□□ -0.77
SMAD4-215ENST00000592911 LINC01553A4QN01 128 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 C2orf72A6NCS6 295 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 CAND2O75155 1236 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 CASTP20810 708 aaKnown RBP10.26□□□□□ -0.77
SMAD4-215ENST00000592911 MCCP23508 829 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 HTRA4P83105 476 aaPredicted RBP10.26□□□□□ -0.77
SMAD4-215ENST00000592911 FOXK2Q01167 660 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 TFAP4Q01664 338 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 PTK7Q13308 1070 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 BAATQ14032 418 aaPredicted RBP10.26□□□□□ -0.77
SMAD4-215ENST00000592911 SLFNL1Q499Z3 407 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 KRT40Q6A162 431 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.26□□□□□ -0.77
SMAD4-215ENST00000592911 GDPD5Q8WTR4 605 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 KHSRPQ92945 711 aaKnown RBP eCLIP10.26□□□□□ -0.776e-7■■■□□ 16.3
SMAD4-215ENST00000592911 PABPC5Q96DU9 382 aaKnown RBP10.26□□□□□ -0.77
SMAD4-215ENST00000592911 SNX27Q96L92 541 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 NAPBQ9H115 298 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 CD320Q9NPF0 282 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 SCUBE2Q9NQ36 999 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 GTF2IRD1Q9UHL9 959 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 ANAPC4Q9UJX5 808 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 MYH7BA7E2Y1 1941 aa10.26□□□□□ -0.77
SMAD4-215ENST00000592911 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 FAM86C2PA6NEL3 165 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 TSPY2A6NKD2 308 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 ORC4O43929 436 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 PRDM1O75626 825 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 GH1P01241 217 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 APPP05067 770 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 FGRP09769 529 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 TXNP10599 105 aaKnown RBP10.25□□□□□ -0.77
SMAD4-215ENST00000592911 PCP11498 1178 aaKnown RBP10.25□□□□□ -0.77
SMAD4-215ENST00000592911 KCNA5P22460 613 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 PDE4AP27815 886 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 SSTR3P32745 418 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-215ENST00000592911 PPARAQ07869 468 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 RNF207Q6ZRF8 634 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 BMP8AQ7Z5Y6 402 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 ADHFE1Q8IWW8 467 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 SIRT2Q8IXJ6 389 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 IWS1Q96ST2 819 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
SMAD4-215ENST00000592911 IRF2BPLQ9H1B7 796 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 TCP11L1Q9NUJ3 509 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 ISY1Q9ULR0 285 aaKnown RBP10.25□□□□□ -0.77
SMAD4-215ENST00000592911 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
SMAD4-215ENST00000592911 RWDD3Q9Y3V2 267 aa10.25□□□□□ -0.77
SMAD4-215ENST00000592911 PTPDC1A2A3K4 754 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 AMHP03971 560 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
SMAD4-215ENST00000592911 CKBP12277 381 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 HOXD8P13378 290 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-215ENST00000592911 ZP2Q05996 745 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 GPNMBQ14956 572 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 DGKDQ16760 1214 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 CCDC62Q6P9F0 684 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 FAM43BQ6ZT52 329 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-215ENST00000592911 KCTD1Q719H9 257 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 TMC2Q8TDI7 906 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 CTAGE1Q96RT6 745 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 CRBNQ96SW2 442 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms