RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	LY6K	Q17RY6	165 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	CHRDL2	Q6WN34	429 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	HEATR3	Q7Z4Q2	680 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	SH3RF1	Q7Z6J0	888 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	MPHOSPH6	Q99547	160 aa	Known RBP	19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	GDF15	Q99988	308 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	AP5M1	Q9H0R1	490 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	STARD7	Q9NQZ5	370 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	DDX41	Q9UJV9	622 aa	Known RBP	19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	ELP1	O95163	1332 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	MYCL	P12524	364 aa	Predicted RBP	19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	CCT2	P78371	535 aa	Known RBP	19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	SP2	Q02086	613 aa		19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	ARHGAP1	Q07960	439 aa		19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	SEMA3F	Q13275	785 aa		19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	TTLL4	Q14679	1199 aa		19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	SLC43A3	Q8NBI5	491 aa		19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	OR6J1	Q8NGC5	347 aa		19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	PSTPIP2	Q9H939	334 aa		19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	PDLIM7	Q9NR12	457 aa		19.94	■□□□□ 0.78
MBD1-221	ENST00000589867	TRIM43B	A6NCK2	446 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867		A6NJR5	290 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	NKRF	O15226	690 aa	Known RBP eCLIP	19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	PPFIA3	O75145	1194 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	ITGB8	P26012	769 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	ANKRD33	Q7Z3H0	272 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	PHKB	Q93100	1093 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	TRIM43	Q96BQ3	446 aa	Predicted RBP	19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	BCAS3	Q9H6U6	928 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	PDRG1	Q9NUG6	133 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	BARHL2	Q9NY43	387 aa		19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	RBM27	Q9P2N5	1060 aa	Known RBP	19.93	■□□□□ 0.78
MBD1-221	ENST00000589867	CCND2	P30279	289 aa		19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	MAGEA10	P43363	369 aa	Predicted RBP	19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	PURA	Q00577	322 aa	Known RBP	19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	PFKFB3	Q16875	520 aa	Predicted RBP	19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	SMARCC2	Q8TAQ2	1214 aa		19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	ZNF274	Q96GC6	653 aa	Predicted RBP	19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	GLT1D1	Q96MS3	346 aa		19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	INPP4A	Q96PE3	977 aa	Predicted RBP	19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	DOCK5	Q9H7D0	1870 aa		19.92	■□□□□ 0.78
MBD1-221	ENST00000589867	CCDC196	A0A1B0GTZ2	297 aa		19.91	■□□□□ 0.78
MBD1-221	ENST00000589867	ARVCF	O00192	962 aa		19.91	■□□□□ 0.78
MBD1-221	ENST00000589867	PRPF3	O43395	683 aa	Known RBP	19.91	■□□□□ 0.78
MBD1-221	ENST00000589867	IFNAR1	P17181	557 aa		19.91	■□□□□ 0.78
MBD1-221	ENST00000589867	PSMC6	P62333	389 aa		19.91	■□□□□ 0.78
MBD1-221	ENST00000589867	FAAP100	Q0VG06	881 aa		19.91	■□□□□ 0.78
MBD1-221	ENST00000589867	AFG1L	Q8WV93	481 aa		19.91	■□□□□ 0.78
MBD1-221	ENST00000589867	RIC8A	Q9NPQ8	531 aa		19.91	■□□□□ 0.78
MBD1-221	ENST00000589867	SZT2	Q5T011	3432 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867		A0A0U1RQG5	324 aa	Predicted RBP	19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	PQBP1	O60828	265 aa	Known RBP	19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	SCG2	P13521	617 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	ICAM3	P32942	547 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	CLK2	P49760	499 aa	Known RBP	19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	NAPA	P54920	295 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	HABP4	Q5JVS0	413 aa	Known RBP	19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	PCNX4	Q63HM2	1172 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	PPP1R18	Q6NYC8	613 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	FAM126B	Q8IXS8	530 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	EMID1	Q96A84	441 aa	Predicted RBP	19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	TOX2	Q96NM4	488 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	RTEL1	Q9NZ71	1219 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	TPCN1	Q9ULQ1	816 aa		19.9	■□□□□ 0.78
MBD1-221	ENST00000589867	CABYR	O75952	493 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	GH1	P01241	217 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	CD4	P01730	458 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	MMP3	P08254	477 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	CUL5	Q93034	780 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	KIF2C	Q99661	725 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	RNF26	Q9BY78	433 aa	Predicted RBP	19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	PCDHA6	Q9UN73	950 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	TELO2	Q9Y4R8	837 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	PCDHA8	Q9Y5H6	950 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	MRVI1	Q9Y6F6	885 aa		19.89	■□□□□ 0.77
MBD1-221	ENST00000589867	LAMA2	P24043	3122 aa	Known RBP	19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	SPATA31C2	B4DYI2	1134 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	hCG_1984214	I3L0E3	225 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	KIAA0355	O15063	1070 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	DTNB	O60941	627 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	CLTB	P09497	229 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	HOXD8	P13378	290 aa	Predicted RBP	19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	UBA1	P22314	1058 aa	Known RBP	19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	BMP8B	P34820	402 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	CPT1A	P50416	773 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	AK2	P54819	239 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	SCRN1	Q12765	414 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	ITGA7	Q13683	1181 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	MYSM1	Q5VVJ2	828 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	ZNF713	Q8N859	430 aa	Predicted RBP	19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	PPP1R13L	Q8WUF5	828 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	KAT2B	Q92831	832 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	PGBD1	Q96JS3	809 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	TMEM260	Q9NX78	707 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	TBX21	Q9UL17	535 aa		19.88	■□□□□ 0.77
MBD1-221	ENST00000589867	SMCO2	A6NFE2	343 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	ZEB2	O60315	1214 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	SORBS3	O60504	671 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	MYL3	P08590	195 aa		19.87	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms