RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 CD4P01730 458 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 SDSP20132 328 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 CPT1AP50416 773 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 ALDH5A1P51649 535 aaPredicted RBP10.17□□□□□ -0.78
CRLF3-205ENST00000583805 ZNF543Q08ER8 600 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 KCNA1Q09470 495 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 DUSP28Q4G0W2 176 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 BRDTQ58F21 947 aaPredicted RBP10.17□□□□□ -0.78
CRLF3-205ENST00000583805 MUM1L1Q5H9M0 696 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 CHD1LQ86WJ1 897 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 DGKHQ86XP1 1220 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 FBXO16Q8IX29 292 aaPredicted RBP10.17□□□□□ -0.78
CRLF3-205ENST00000583805 SLC43A3Q8NBI5 491 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 DNERQ8NFT8 737 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.78
CRLF3-205ENST00000583805 SEMA6BQ9H3T3 888 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 INCENPQ9NQS7 918 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 DIAPH3Q9NSV4 1193 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 MTMR7Q9Y216 660 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 CUL9Q8IWT3 2517 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 TET1Q8NFU7 2136 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 MICAL3Q7RTP6 2002 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 FRMPD2Q68DX3 1309 aaPredicted RBP10.16□□□□□ -0.78
CRLF3-205ENST00000583805 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.16□□□□□ -0.78
CRLF3-205ENST00000583805 PTPDC1A2A3K4 754 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 BRD1O95696 1058 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 SMPD1P17405 629 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 RFX1P22670 979 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 GCGRP47871 477 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 HAND2P61296 217 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 NUCB1Q02818 461 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 ITGA7Q13683 1181 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 TAPT1Q6NXT6 567 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 RNF207Q6ZRF8 634 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 KIAA1211Q6ZU35 1233 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 RASGRP2Q7LDG7 609 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 FAM161BQ96MY7 647 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 CDX2Q99626 313 aaPredicted RBP10.16□□□□□ -0.78
CRLF3-205ENST00000583805 DSCC1Q9BVC3 393 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 LHX6Q9UPM6 363 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 SIP14410 1827 aa10.16□□□□□ -0.78
CRLF3-205ENST00000583805 NEDD4P46934 1319 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 RBM47A0AV96 593 aaKnown RBP10.15□□□□□ -0.78
CRLF3-205ENST00000583805 NFIBO00712 420 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 SLC16A2P36021 539 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 EPHB4P54760 987 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 BEX3Q00994 111 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 BAATQ14032 418 aaPredicted RBP10.15□□□□□ -0.78
CRLF3-205ENST00000583805 IMMTQ16891 758 aaKnown RBP10.15□□□□□ -0.78
CRLF3-205ENST00000583805 ASPRV1Q53RT3 343 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 TTBK2Q6IQ55 1244 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 CXCL17Q6UXB2 119 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 TBC1D10CQ8IV04 446 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 PLEKHM2Q8IWE5 1019 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.15□□□□□ -0.78
CRLF3-205ENST00000583805 RGS22Q8NE09 1264 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 CHMP4CQ96CF2 233 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.15□□□□□ -0.78
CRLF3-205ENST00000583805 KRT23Q9C075 422 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 TTYH1Q9H313 450 aaPredicted RBP10.15□□□□□ -0.78
CRLF3-205ENST00000583805 HIPK3Q9H422 1215 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 CNNM2Q9H8M5 875 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 IL23AQ9NPF7 189 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 CTNNA3Q9UI47 895 aa10.15□□□□□ -0.78
CRLF3-205ENST00000583805 NLRC5Q86WI3 1866 aa10.15□□□□□ -0.79
CRLF3-205ENST00000583805 TRANK1O15050 2925 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 ABCB11O95342 1321 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 DYNC1LI2O43237 492 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-205ENST00000583805 HOXA2O43364 376 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 KPNA6O60684 536 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 PFKMP08237 780 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 SUPT20HL2P0C7V6 817 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 FOSL2P15408 326 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 EDNRBP24530 442 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 SOX11P35716 441 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 SNAP25P60880 206 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 RPS6P62753 249 aaKnown RBP10.14□□□□□ -0.79
CRLF3-205ENST00000583805 PPP2R5BQ15173 497 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 TMEM240Q5SV17 173 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 RASIP1Q5U651 963 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 B4GALNT3Q6L9W6 998 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 CWC27Q6UX04 472 aaKnown RBP10.14□□□□□ -0.79
CRLF3-205ENST00000583805 SLC30A10Q6XR72 485 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 EEPD1Q7L9B9 569 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 RPUSD2Q8IZ73 545 aaKnown RBP10.14□□□□□ -0.79
CRLF3-205ENST00000583805 PNMA1Q8ND90 353 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 MAFAQ8NHW3 353 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-205ENST00000583805 SCFD2Q8WU76 684 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 CLEC4DQ8WXI8 215 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 ANKS1AQ92625 1134 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 WDR11Q9BZH6 1224 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 PPP1R12CQ9BZL4 782 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 KAT14Q9H8E8 782 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 PDGFCQ9NRA1 345 aa10.14□□□□□ -0.79
CRLF3-205ENST00000583805 COL4A4P53420 1690 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-205ENST00000583805 CHD9Q3L8U1 2897 aa10.13□□□□□ -0.79
CRLF3-205ENST00000583805 CSF2RAP15509 400 aa10.13□□□□□ -0.79
CRLF3-205ENST00000583805 CALML3P27482 149 aa10.13□□□□□ -0.79
CRLF3-205ENST00000583805 PTPN11Q06124 597 aaPredicted RBP10.13□□□□□ -0.79
CRLF3-205ENST00000583805 TTLL4Q14679 1199 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms