RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMG6-219ENST00000575663 FTSJ3Q8IY81 847 aaKnown RBP6.98□□□□□ -1.29
SMG6-219ENST00000575663 TRMT2AQ8IZ69 625 aaKnown RBP6.98□□□□□ -1.29
SMG6-219ENST00000575663 DNERQ8NFT8 737 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 RHPN1Q8TCX5 695 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 PURBQ96QR8 312 aaKnown RBP6.98□□□□□ -1.29
SMG6-219ENST00000575663 IL1RAPL2Q9NP60 686 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 PNMA2Q9UL42 364 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 GREB1LQ9C091 1923 aaPredicted RBP6.97□□□□□ -1.29
SMG6-219ENST00000575663 DMDP11532 3685 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 PRR23AA6NEV1 266 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 C5orf67F2Z3F1 127 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 H0Y858 1186 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 PRDM1O75626 825 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 GH1P01241 217 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 RB1P06400 928 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 SLC3A2P08195 630 aaKnown RBP6.97□□□□□ -1.29
SMG6-219ENST00000575663 MCCP23508 829 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 EDNRBP24530 442 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 AVPR2P30518 371 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 VCPP55072 806 aaKnown RBP6.97□□□□□ -1.29
SMG6-219ENST00000575663 HYAL1Q12794 435 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 MKRN4PQ13434 485 aaPredicted RBP6.97□□□□□ -1.29
SMG6-219ENST00000575663 DGKDQ16760 1214 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 CCDC96Q2M329 555 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 TCTN1Q2MV58 587 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 SLFNL1Q499Z3 407 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 ZNF618Q5T7W0 954 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 ZKSCAN2Q63HK3 967 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 SLC30A10Q6XR72 485 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 KCTD1Q719H9 257 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 ASCL5Q7RTU5 278 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 ZBTB33Q86T24 672 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 ITPRIPQ8IWB1 547 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 DHX37Q8IY37 1157 aaKnown RBP6.97□□□□□ -1.29
SMG6-219ENST00000575663 FIBCD1Q8N539 461 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 DBF4BQ8NFT6 615 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 AFG1LQ8WV93 481 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 SEPT8Q92599 483 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 COPS5Q92905 334 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 TOP1MTQ969P6 601 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 KIF1BPQ96EK5 621 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 CTAGE1Q96RT6 745 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 IFIH1Q9BYX4 1025 aaKnown RBP6.97□□□□□ -1.29
SMG6-219ENST00000575663 PUS7LQ9H0K6 701 aaKnown RBP6.97□□□□□ -1.29
SMG6-219ENST00000575663 BOLA2Q9H3K6 86 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 TLR9Q9NR96 1032 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 PRR12Q9ULL5 1215 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 STX8Q9UNK0 236 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 TNNQ9UQP3 1299 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 TRPC6Q9Y210 931 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 MCM3APO60318 1980 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 SCN10AQ9Y5Y9 1956 aa6.97□□□□□ -1.29
SMG6-219ENST00000575663 RSPH10B2B2RC85 870 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 LOC730098B7Z3J9 87 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 NFIBO00712 420 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 GALR2O43603 387 aaPredicted RBP6.96□□□□□ -1.3
SMG6-219ENST00000575663 UPP2O95045 317 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 CSPG5O95196 566 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 EYA4O95677 639 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 MMP1P03956 469 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 RSPH10BP0C881 870 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 GNAT2P19087 354 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 NBL1P41271 181 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 PSEN2P49810 448 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 SNAP25P60880 206 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 DLX2Q07687 328 aaPredicted RBP6.96□□□□□ -1.3
SMG6-219ENST00000575663 MFSD10Q14728 455 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 CBX2Q14781 532 aaPredicted RBP6.96□□□□□ -1.3
SMG6-219ENST00000575663 RCSD1Q6JBY9 416 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 CEP85Q6P2H3 762 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 RNF207Q6ZRF8 634 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 SMRP1Q8NCR6 262 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 NEDD1Q8NHV4 660 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 APBB2Q92870 758 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 NKD2Q969F2 451 aaPredicted RBP6.96□□□□□ -1.3
SMG6-219ENST00000575663 ASIC4Q96FT7 647 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 ALG1Q9BT22 464 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 PHF7Q9BWX1 381 aaPredicted RBP6.96□□□□□ -1.3
SMG6-219ENST00000575663 RANBP17Q9H2T7 1088 aaKnown RBP6.96□□□□□ -1.3
SMG6-219ENST00000575663 IGFLR1Q9H665 355 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 HDAC6Q9UBN7 1215 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 ADGRA3Q8IWK6 1321 aa6.96□□□□□ -1.3
SMG6-219ENST00000575663 PTPRSQ13332 1948 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 FSD2A1L4K1 749 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 GSG1L2A8MUP6 293 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 CAND2O75155 1236 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 ARIH2O95376 493 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 F2P00734 622 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 APPP05067 770 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 ICAM3P32942 547 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 BMPR1AP36894 532 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 THPOP40225 353 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 RPS6P62753 249 aaKnown RBP6.95□□□□□ -1.3
SMG6-219ENST00000575663 MBTPS1Q14703 1052 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 PTPN21Q16825 1174 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 KIAA0753Q2KHM9 967 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 TRIM71Q2Q1W2 868 aaKnown RBP6.95□□□□□ -1.3
SMG6-219ENST00000575663 PLEKHG4Q58EX7 1191 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 TRAF7Q6Q0C0 670 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms