RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 MYO9BQ13459 2157 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 PNMA6FA0A0J9YX94 578 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 A6NJR5 290 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 OPLAHO14841 1288 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 SLC27A2O14975 620 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 SORBS3O60504 671 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 EIF3JO75822 258 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 DDAH1O94760 285 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 MMP3P08254 477 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 CYP2C9P11712 490 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 DNAJB2P25686 324 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 TMEM240Q5SV17 173 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 CREB3L3Q68CJ9 461 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 ZNF365Q70YC5 407 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 IGDCC4Q8TDY8 1250 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 RRP36Q96EU6 259 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 SCLYQ96I15 445 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 GUCD1Q96NT3 240 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 LY9Q9HBG7 655 aa11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 MAP3K20Q9NYL2 800 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-216ENST00000574344 ZBBXA8MT70 800 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 SH2B2O14492 632 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 CYTH3O43739 400 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 FGBP02675 491 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 CASTP20810 708 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 CCND2P30279 289 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 ARHGAP1Q07960 439 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 PGM5Q15124 567 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 SLC35G1Q2M3R5 365 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 BMP2KLQ5H9B9 411 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 RNF20Q5VTR2 975 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 NFRKBQ6P4R8 1299 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 CCDC62Q6P9F0 684 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 OTOP2Q7RTS6 562 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 RAB11FIP4Q86YS3 637 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 DHX37Q8IY37 1157 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 SAMD3Q8N6K7 520 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 CUL5Q93034 780 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 TMEM87BQ96K49 555 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 PDCD2LQ9BRP1 358 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 ANP32EQ9BTT0 268 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 LRRC2Q9BYS8 371 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 WNT8AQ9H1J5 351 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 SEMA6BQ9H3T3 888 aa11.16□□□□□ -0.62
NPLOC4-216ENST00000574344 EYSQ5T1H1 3165 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 TMEM265A0A087WTH1 108 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 CALM1P0DP23 149 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 CALM2P0DP24 149 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 CALM3P0DP25 149 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 RXRAP19793 462 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 GNAQP50148 359 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 GHRHRQ02643 423 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 PTPN11Q06124 597 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 DGKDQ16760 1214 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 KCNV1Q6PIU1 500 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 C16orf59Q7L2K0 433 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 DEFB128Q7Z7B8 93 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 RPUSD2Q8IZ73 545 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 TMTC2Q8N394 836 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 CCDC155Q8N6L0 562 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 IL31RAQ8NI17 732 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 SMARCC2Q8TAQ2 1214 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 MYLIPQ8WY64 445 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 MAP3K14Q99558 947 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 CDX2Q99626 313 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 LZTS2Q9BRK4 669 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 ALG1Q9BT22 464 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 MTA3Q9BTC8 594 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 KATNAL1Q9BW62 490 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 SPZ1Q9BXG8 430 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 TTYH1Q9H313 450 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 DDX41Q9UJV9 622 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 TET1Q8NFU7 2136 aa11.15□□□□□ -0.62
NPLOC4-216ENST00000574344 CDH23Q9H251 3354 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 PTPRSQ13332 1948 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 CDC45O75419 566 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 PLEKHA8P1O95397 391 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 GGPS1O95749 300 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 ZNF286BP0CG31 522 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 FOSL2P15408 326 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 BFSP2Q13515 415 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 LAMC2Q13753 1193 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 BECN1Q14457 450 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 PTGISQ16647 500 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 SYNE3Q6ZMZ3 975 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 MICU3Q86XE3 530 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 CCDC82Q8N4S0 544 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 PPTC7Q8NI37 304 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 HERVK_113Q902F9 699 aa11.14□□□□□ -0.63
NPLOC4-216ENST00000574344 MSRAQ9UJ68 235 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms