RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 PDCD2LQ9BRP1 358 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 HTATIP2Q9BUP3 242 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 SPC25Q9HBM1 224 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 SYNRGQ9UMZ2 1314 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 STXBP3O00186 592 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 SCRN1Q12765 414 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 PGM5Q15124 567 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 LRRC41Q15345 812 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 TYW1BQ6NUM6 668 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 SCFD2Q8WU76 684 aa14.37□□□□□ -0.11
NSMCE1-214ENST00000569236 RBM47A0AV96 593 aaKnown RBP14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 PFKFB2O60825 505 aa14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 ADAMTS4O75173 837 aa14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 EIF3JO75822 258 aaKnown RBP14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 CDKL5O76039 1030 aa14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 C6orf222P0C671 652 aaPredicted RBP14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 MYCLP12524 364 aaPredicted RBP14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 SMPD1P17405 629 aa14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 SSRP1Q08945 709 aaKnown RBP14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 PKN1Q16512 942 aa14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 ME3Q16798 604 aa14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 CCDC12Q8WUD4 166 aaPredicted RBP14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 WDR11Q9BZH6 1224 aa14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 KIAA1217Q5T5P2 1943 aa14.36□□□□□ -0.11
NSMCE1-214ENST00000569236 SMCO2A6NFE2 343 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 SPDYE3A6NKU9 549 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 COL6A1P12109 1028 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 ADCY7P51828 1080 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 GJA9P57773 515 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 TTLL4Q14679 1199 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 UBE2SQ16763 222 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 DUSP28Q4G0W2 176 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 SEPT14Q6ZU15 432 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 TLK2Q86UE8 772 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 VSIG10LQ86VR7 867 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 TEX2Q8IWB9 1127 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 SENP6Q9GZR1 1112 aaPredicted RBP14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 RIC8AQ9NPQ8 531 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 PDE4DIPQ5VU43 2346 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 FRMPD4Q14CM0 1322 aa14.35□□□□□ -0.11
NSMCE1-214ENST00000569236 CCND2P30279 289 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 ST3GAL1Q11201 340 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 TPRNQ4KMQ1 711 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 IL31RAQ8NI17 732 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 AP5M1Q9H0R1 490 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 UPF3AQ9H1J1 476 aaKnown RBP14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 SMC3Q9UQE7 1217 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 Q9Y3F1 56 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 NKRFO15226 690 aaKnown RBP eCLIP14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 DYNC1LI2O43237 492 aaPredicted RBP14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 DEXIO95424 95 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 TXNP10599 105 aaKnown RBP14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 TMEM63BQ5T3F8 832 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 MCTP1Q6DN14 999 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 CCDC83Q8IWF9 413 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 CCDC148Q8NFR7 591 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 DPF3Q92784 378 aa14.34□□□□□ -0.11
NSMCE1-214ENST00000569236 DNAH12Q6ZR08 3092 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 ESYT2A0FGR8 921 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 MYADML2A6NDP7 307 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 PDIA4P13667 645 aaKnown RBP14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 CST5P28325 142 aaPredicted RBP14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 KLHL40Q2TBA0 621 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 GNASQ5JWF2 1037 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 NECAB1Q8N987 351 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 PCSK9Q8NBP7 692 aaKnown RBP14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 KLHDC9Q8NEP7 349 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 GTF3C6Q969F1 213 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 TSEN34Q9BSV6 310 aaKnown RBP14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 ZMYND12Q9H0C1 365 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 EHMT1Q9H9B1 1298 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 C6orf50Q9HD87 102 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 PCDHA6Q9UN73 950 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 PHF24Q9UPV7 400 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 PCDHA8Q9Y5H6 950 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 MRVI1Q9Y6F6 885 aa14.33□□□□□ -0.12
NSMCE1-214ENST00000569236 MOXD2PA6NHM9 499 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 STAM2O75886 525 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 ARIH2O95376 493 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 FOSP01100 380 aaPredicted RBP14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 PTGS1P23219 599 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 GNA11P29992 359 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 NKX3-2P78367 333 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 KCNA10Q16322 511 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 FSCN1Q16658 493 aaKnown RBP14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 PCNX4Q63HM2 1172 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 XRRA1Q6P2D8 792 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 FERMT2Q96AC1 680 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 LMBRD1Q9NUN5 540 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 VPS54Q9P1Q0 977 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 STX6O43752 255 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 RGS20O76081 388 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 SYT1P21579 422 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 ACLYP53396 1101 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 MRPS9P82933 396 aaKnown RBP14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 BEX3Q00994 111 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms