RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MAD2L2Q9UI95 211 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 SCN5AQ14524 2016 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 ABCB11O95342 1321 aa18.14■□□□□ 0.49
USB1-208ENST00000563207 KIAA1217Q5T5P2 1943 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 ZEB2O60315 1214 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 DNAJB2P25686 324 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 RCAN1P53805 252 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 PPP2R5BQ15173 497 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 NBPF20Q3BBV1 942 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 SEPT14Q6ZU15 432 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 Q6ZUG5 572 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 FBXO11Q86XK2 927 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 RGS22Q8NE09 1264 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 ZFP91Q96JP5 570 aaPredicted RBP18.13■□□□□ 0.49
USB1-208ENST00000563207 LRRC2Q9BYS8 371 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 GPHNQ9NQX3 736 aaPredicted RBP18.13■□□□□ 0.49
USB1-208ENST00000563207 SLC12A7Q9Y666 1083 aa18.13■□□□□ 0.49
USB1-208ENST00000563207 SCN10AQ9Y5Y9 1956 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 LOC102724159A0A0B4J2E5 919 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.12■□□□□ 0.49
USB1-208ENST00000563207 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.12■□□□□ 0.49
USB1-208ENST00000563207 KLRF2D3W0D1 207 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 KIF5BP33176 963 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 CHMP4BP1P59074 171 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 PWP2Q15269 919 aaKnown RBP18.12■□□□□ 0.49
USB1-208ENST00000563207 CCDC62Q6P9F0 684 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 SCFD2Q8WU76 684 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 PBX4Q9BYU1 374 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 IL23AQ9NPF7 189 aa18.12■□□□□ 0.49
USB1-208ENST00000563207 BAZ2BQ9UIF8 2168 aaKnown RBP18.12■□□□□ 0.49
USB1-208ENST00000563207 PALM3A6NDB9 673 aaPredicted RBP18.11■□□□□ 0.49
USB1-208ENST00000563207 CFBP00751 764 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 CPA1P15085 419 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 EIF2AK2P19525 551 aaKnown RBP18.11■□□□□ 0.49
USB1-208ENST00000563207 GNAQP50148 359 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 CPT1AP50416 773 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 EVCP57679 992 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 GRM4Q14833 912 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 FAM47CQ5HY64 1035 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 OTOP2Q7RTS6 562 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 CTCFLQ8NI51 663 aaPredicted RBP18.11■□□□□ 0.49
USB1-208ENST00000563207 AFG1LQ8WV93 481 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 MTMR8Q96EF0 704 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 TCEANC2Q96MN5 208 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 RMDN3Q96TC7 470 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 LZTS2Q9BRK4 669 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 MTG1Q9BT17 334 aaPredicted RBP18.11■□□□□ 0.49
USB1-208ENST00000563207 PDRG1Q9NUG6 133 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 POLR3EQ9NVU0 708 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 PNMA2Q9UL42 364 aa18.11■□□□□ 0.49
USB1-208ENST00000563207 MYH7BA7E2Y1 1941 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 A6NJR5 290 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 CYTH3O43739 400 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 SORBS3O60504 671 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 SMARCA1P28370 1054 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 HOXA13P31271 388 aaPredicted RBP18.1■□□□□ 0.49
USB1-208ENST00000563207 ANKRD1Q15327 319 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 APOA5Q6Q788 366 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 HOMER1Q86YM7 354 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 PIGSQ96S52 555 aa18.1■□□□□ 0.49
USB1-208ENST00000563207 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
USB1-208ENST00000563207 MRPL11Q9Y3B7 192 aaKnown RBP18.1■□□□□ 0.49
USB1-208ENST00000563207 REV3LO60673 3130 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 CHD7Q9P2D1 2997 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 ZBTB43O43298 467 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 FGBP02675 491 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 ARHGAP1Q07960 439 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 MAFAQ8NHW3 353 aaPredicted RBP18.09■□□□□ 0.49
USB1-208ENST00000563207 IL31RAQ8NI17 732 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 NSUN6Q8TEA1 469 aaKnown RBP18.09■□□□□ 0.49
USB1-208ENST00000563207 PIBF1Q8WXW3 757 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 HERVK_113Q902F9 699 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 BRF1Q92994 677 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 TIFAQ96CG3 184 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 TBC1D32Q96NH3 1257 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 ZNF576Q9H609 170 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 PXMP2Q9NR77 195 aa18.09■□□□□ 0.49
USB1-208ENST00000563207 RBM28Q9NW13 759 aaKnown RBP18.09■□□□□ 0.49
USB1-208ENST00000563207 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 CCDC196A0A1B0GTZ2 297 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 ZBTB5O15062 677 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 HSD17B4P51659 736 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 RABGGTBP53611 331 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 TTLL4Q14679 1199 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 ARHGEF16Q5VV41 709 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 PSRC1Q6PGN9 363 aaPredicted RBP18.08■□□□□ 0.48
USB1-208ENST00000563207 DEFB128Q7Z7B8 93 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 MCF2L2Q86YR7 1114 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.08■□□□□ 0.48
USB1-208ENST00000563207 KAT2BQ92831 832 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 MYL10Q9BUA6 226 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 AMNQ9BXJ7 453 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 YBX2Q9Y2T7 364 aaKnown RBP18.08■□□□□ 0.48
USB1-208ENST00000563207 PCDHA1Q9Y5I3 950 aa18.08■□□□□ 0.48
USB1-208ENST00000563207 NKRFO15226 690 aaKnown RBP eCLIP18.07■□□□□ 0.48
USB1-208ENST00000563207 RGS20O76081 388 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 NR3C2P08235 984 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 MYCLP12524 364 aaPredicted RBP18.07■□□□□ 0.48
USB1-208ENST00000563207 MYOGP15173 224 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms